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小分子 LEA 蛋白可减轻在 plunge 冷冻过程中脆弱的 cryo-EM 样品在气-液界面处的损伤。

Small LEA proteins mitigate air-water interface damage to fragile cryo-EM samples during plunge freezing.

机构信息

Department of Biochemistry, University of Wisconsin-Madison, Madison, WI, 53706, USA.

John and Jeanne Rowe Center for Research in Virology, Morgridge Institute for Research, Madison, WI, 53715, USA.

出版信息

Nat Commun. 2024 Sep 4;15(1):7705. doi: 10.1038/s41467-024-52091-1.

Abstract

Air-water interface (AWI) interactions during cryo-electron microscopy (cryo-EM) sample preparation cause significant sample loss, hindering structural biology research. Organisms like nematodes and tardigrades produce Late Embryogenesis Abundant (LEA) proteins to withstand desiccation stress. Here we show that these LEA proteins, when used as additives during plunge freezing, effectively mitigate AWI damage to fragile multi-subunit molecular samples. The resulting high-resolution cryo-EM maps are comparable to or better than those obtained using existing AWI damage mitigation methods. Cryogenic electron tomography reveals that particles are localized at specific interfaces, suggesting LEA proteins form a barrier at the AWI. This interaction may explain the observed sample-dependent preferred orientation of particles. LEA proteins offer a simple, cost-effective, and adaptable approach for cryo-EM structural biologists to overcome AWI-related sample damage, potentially revitalizing challenging projects and advancing the field of structural biology.

摘要

气-液界面(AWI)在冷冻电子显微镜(cryo-EM)样品制备过程中的相互作用会导致大量样品损失,从而阻碍结构生物学研究。线虫和缓步动物等生物会产生晚期胚胎丰富(LEA)蛋白以耐受干燥应激。在这里,我们表明,这些 LEA 蛋白在进行倾冻时作为添加剂使用,可有效减轻脆弱的多亚基分子样品的 AWI 损伤。得到的高分辨率 cryo-EM 图谱与使用现有 AWI 损伤缓解方法获得的图谱相当或更好。低温电子断层扫描显示颗粒定位于特定界面,表明 LEA 蛋白在 AWI 处形成屏障。这种相互作用可能解释了观察到的颗粒与样品相关的优先取向。LEA 蛋白为 cryo-EM 结构生物学家提供了一种简单、经济有效且适应性强的方法,可克服与 AWI 相关的样品损伤,可能会恢复具有挑战性的项目并推动结构生物学领域的发展。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7d62/11375022/d4aac2057ca7/41467_2024_52091_Fig1_HTML.jpg

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