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采用蛋白质组全谱热分析和蛋白质靶标特性预测化学混合物的毒理学。

Predictive toxicology of chemical mixtures using proteome-wide thermal profiling and protein target properties.

机构信息

Department of Biomedical and Clinical Sciences, Cell Biology, Faculty of Medicine, Linköping University, Linköping, 581 85, Sweden.

Department of Biomedical and Clinical Sciences, Cell Biology, Faculty of Medicine, Linköping University, Linköping, 581 85, Sweden; Ikerbasque, Basque Foundation for Sciences, Department of Physiology, Faculty of Medicine, and Nursing, University of the Basque Country UPV/EHU, Leioa, 489 40, Spain.

出版信息

Chemosphere. 2024 Sep;364:143228. doi: 10.1016/j.chemosphere.2024.143228. Epub 2024 Sep 2.

Abstract

Our capability to predict the impact of exposure to chemical mixtures on environmental and human health is limited in comparison to the advances on the chemical characterization of the exposome. Current approaches, such as new approach methodologies, rely on the characterization of the chemicals and the available toxicological knowledge of individual compounds. In this study, we show a new methodological approach for the assessment of chemical mixtures based on a proteome-wide identification of the protein targets and revealing the relevance of new targets based on their role in the cellular function. We applied a proteome integral solubility alteration assay to identify 24 protein targets from a chemical mixture of 2,3,7,8-tetrachlorodibenzo-p-dioxin, alpha-endosulfan, and bisphenol A among the HepG2 soluble proteome, and validated the chemical mixture-target interaction orthogonally. To define the range of interactive capability of the new targets, the data from intrinsic properties of the targets were retrieved. Introducing the target properties as criteria for a multi-criteria decision-making analysis called the analytical hierarchy process, the prioritization of targets was based on their involvement in multiple pathways. This methodological approach that we present here opens a more realistic and achievable scenario to address the impact of complex and uncharacterized chemical mixtures in biological systems.

摘要

相比暴露组化学特征的研究进展,我们预测接触化学混合物对环境和人类健康影响的能力有限。目前的方法,如新方法学,依赖于对化学物质的特征描述和对单个化合物的可用毒理学知识。在这项研究中,我们展示了一种新的基于蛋白质组学的化学混合物评估方法,该方法通过对蛋白质靶标的全蛋白组鉴定,揭示新靶标在细胞功能中的作用,从而确定其相关性。我们应用蛋白质组整体可溶性改变分析,从 2,3,7,8-四氯二苯并对二恶英、α-硫丹和双酚 A 的化学混合物中鉴定出 24 个蛋白质靶标,这是 HepG2 可溶性蛋白质组中的一部分,并通过正交实验验证了化学混合物-靶标相互作用。为了定义新靶标的交互作用能力范围,我们从靶标的固有特性中获取数据。将目标特性作为称为层次分析法的多标准决策分析的标准引入,根据它们在多个途径中的参与程度对目标进行优先级排序。我们在这里提出的这种方法为解决生物系统中复杂且未特征化的化学混合物的影响提供了更现实和可行的方案。

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