Quantitative Healthcare Analysis (qurAI) Group, Informatics Institute, University of Amsterdam, Amsterdam, The Netherlands.
Amsterdam UMC location University of Amsterdam, Biomedical Engineering and Physics, Amsterdam, The Netherlands.
Transl Vis Sci Technol. 2024 Sep 3;13(9):11. doi: 10.1167/tvst.13.9.11.
The purpose of this study was to develop a deep learning algorithm for detecting and quantifying incomplete retinal pigment epithelium and outer retinal atrophy (iRORA) and complete retinal pigment epithelium and outer retinal atrophy (cRORA) in optical coherence tomography (OCT) that generalizes well to data from different devices and to validate in an intermediate age-related macular degeneration (iAMD) cohort.
The algorithm comprised a domain adaptation (DA) model, promoting generalization across devices, and a segmentation model for detecting granular biomarkers defining iRORA/cRORA, which are combined into iRORA/cRORA segmentations. Manual annotations of iRORA/cRORA in OCTs from different devices in the MACUSTAR study (168 patients with iAMD) were compared to the algorithm's output. Eye level classification metrics included sensitivity, specificity, and quadratic weighted Cohen's κ score (κw). Segmentation performance was assessed quantitatively using Bland-Altman plots and qualitatively.
For ZEISS OCTs, sensitivity and specificity for iRORA/cRORA classification were 38.5% and 93.1%, respectively, and 60.0% and 96.4% for cRORA. For Spectralis OCTs, these were 84.0% and 93.7% for iRORA/cRORA, and 62.5% and 97.4% for cRORA. The κw scores for 3-way classification (none, iRORA, and cRORA) were 0.37 and 0.73 for ZEISS and Spectralis, respectively. Removing DA reduced κw from 0.73 to 0.63 for Spectralis.
The DA-enabled iRORA/cRORA segmentation algorithm showed superior consistency compared to human annotations, and good generalization across OCT devices.
The application of this algorithm may help toward precise and automated tracking of iAMD-related lesion changes, which is crucial in clinical settings and multicenter longitudinal studies on iAMD.
本研究旨在开发一种用于光学相干断层扫描(OCT)中检测和量化不完全性视网膜色素上皮和外层视网膜萎缩(iRORA)和完全性视网膜色素上皮和外层视网膜萎缩(cRORA)的深度学习算法,该算法能够很好地推广到来自不同设备的数据,并在中间年龄相关性黄斑变性(iAMD)队列中进行验证。
该算法包括一个域自适应(DA)模型,促进了设备间的泛化,以及一个用于检测定义 iRORA/cRORA 的颗粒状生物标志物的分割模型,这些模型结合起来形成 iRORA/cRORA 分割。将 MACUSTAR 研究中来自不同设备的 OCT 中的 iRORA/cRORA 手动注释与算法输出进行比较。眼水平分类指标包括敏感性、特异性和二次加权 Cohen's κ 评分(κw)。使用 Bland-Altman 图和定性评估来评估分割性能的定量和定性。
对于蔡司 OCT,iRORA/cRORA 分类的敏感性和特异性分别为 38.5%和 93.1%,cRORA 分别为 60.0%和 96.4%。对于 Spectralis OCT,iRORA/cRORA 的敏感性和特异性分别为 84.0%和 93.7%,cRORA 分别为 62.5%和 97.4%。3 路分类(无、iRORA 和 cRORA)的 κw 评分分别为蔡司和 Spectralis 的 0.37 和 0.73。Spectralis 中去除 DA 后,κw 从 0.73 降至 0.63。
启用 DA 的 iRORA/cRORA 分割算法与人工注释相比具有更高的一致性,并且在 OCT 设备之间具有良好的泛化能力。
杨硕