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起伏的自由能景观缓冲氧化还原链免受环境波动的影响。

Undulating Free Energy Landscapes Buffer Redox Chains from Environmental Fluctuations.

机构信息

Department of Chemistry, Duke University, Durham, North Carolina 27708, United States.

Department of Biochemistry, Duke University, Durham, North Carolina 27710, United States.

出版信息

J Phys Chem B. 2024 Sep 19;128(37):8933-8945. doi: 10.1021/acs.jpcb.4c04637. Epub 2024 Sep 8.


DOI:10.1021/acs.jpcb.4c04637
PMID:39244677
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11753782/
Abstract

Roller-coaster or undulating free energy landscapes, with alternating high and low potential cofactors, occur frequently in biological redox chains. Yet, there is little understanding of the possible advantages created by these landscapes. We examined the tetraheme subunit associated with reaction centers, comparing the dynamics of the native protein and of hypothetical (in silico) mutants. We computed the variation in the total number of electrons in wild type (WT) and mutant tetrahemes connected to an electron reservoir in the presence of a time-varying potential, as a model for a fluctuating redox environment. We found that roller-coaster free energy landscapes buffer the redox cofactor populations from these fluctuations. The WT roller-coaster landscape slows forward and backward electron transfer in the face of fluctuations, and may offer the advantage of sustaining the reduction of essential cofactors, such as the chlorophyll special pair in photosynthesis, even though an undulating landscape introduces thermodynamically uphill steps in multistep redox chains.

摘要

过山车或波浪形的自由能景观,具有交替的高和低势能辅助因子,在生物氧化还原链中经常出现。然而,对于这些景观可能带来的优势,人们知之甚少。我们研究了与反应中心相关的四血红素亚基,比较了天然蛋白和假设的(计算机模拟)突变体的动力学。我们计算了在时变势存在下,与电子储库相连的野生型(WT)和突变四血红素中总电子数的变化,作为波动氧化还原环境的模型。我们发现,过山车式的自由能景观缓冲了氧化还原辅助因子对这些波动的影响。WT 过山车式景观减缓了面对波动时的电子得失,并且可能具有维持重要辅助因子还原的优势,例如光合作用中的叶绿素特殊对,尽管在多步氧化还原链中,波浪形景观会引入热力学上坡步骤。

相似文献

[1]
Undulating Free Energy Landscapes Buffer Redox Chains from Environmental Fluctuations.

J Phys Chem B. 2024-9-19

[2]
Kinetic performance and energy profile in a roller coaster electron transfer chain: a study of modified tetraheme-reaction center constructs.

J Am Chem Soc. 2006-3-29

[3]
Simulation of the electron transfer between the tetraheme subunit and the special pair of the photosynthetic reaction center using a microstate description.

J Phys Chem B. 2007-3-22

[4]
Electrostatic interaction between redox cofactors in photosynthetic reaction centers.

J Biol Chem. 2004-11-12

[5]
Ultrafast structural changes within a photosynthetic reaction centre.

Nature. 2021-1

[6]
Uphill electron transfer in the tetraheme cytochrome subunit of the Rhodopseudomonas viridis photosynthetic reaction center: evidence from site-directed mutagenesis.

Biochemistry. 2000-4-4

[7]
Different mechanisms of the binding of soluble electron donors to the photosynthetic reaction center of Rubrivivax gelatinosus and Blastochloris viridis.

J Biol Chem. 2001-6-29

[8]
Biological electron transfer.

J Bioenerg Biomembr. 1995-6

[9]
Light-induced structural changes in a photosynthetic reaction center caught by Laue diffraction.

Science. 2010-4-30

[10]
Kinetics, energetics, and electronic coupling of the primary electron transfer reactions in mutated reaction centers of Blastochloris viridis.

Biophys J. 2002-6

本文引用的文献

[1]
Correlated particle transport enables biological free energy transduction.

Biophys J. 2023-5-16

[2]
Nanosecond heme-to-heme electron transfer rates in a multiheme cytochrome nanowire reported by a spectrally unique His/Met-ligated heme.

Proc Natl Acad Sci U S A. 2021-9-28

[3]
Ultrafast structural changes within a photosynthetic reaction centre.

Nature. 2021-1

[4]
Universal free-energy landscape produces efficient and reversible electron bifurcation.

Proc Natl Acad Sci U S A. 2020-8-14

[5]
Functionalization of Bacterial Microcompartment Shell Proteins With Covalently Attached Heme.

Front Bioeng Biotechnol. 2020-1-9

[6]
Kinetics of trifurcated electron flow in the decaheme bacterial proteins MtrC and MtrF.

Proc Natl Acad Sci U S A. 2019-2-12

[7]
Electron transfer and transport through multi-heme proteins: recent progress and future directions.

Curr Opin Chem Biol. 2018-7-14

[8]
Multifunctional Cytochrome c: Learning New Tricks from an Old Dog.

Chem Rev. 2017-10-13

[9]
Multi-haem cytochromes in Shewanella oneidensis MR-1: structures, functions and opportunities.

J R Soc Interface. 2015-1-6

[10]
Charge transfer in dynamical biosystems, or the treachery of (static) images.

Acc Chem Res. 2015-2-17

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