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新型噬菌体 vB_VpM-pA2SJ1 的生物学和基因组特征分析,该噬菌体感染与急性肝胰腺坏死病相关的副溶血弧菌。

Biological and genomic characterization of the novel bacteriophage vB_VpM-pA2SJ1, which infects Vibrio parahaemolyticus associated with acute hepatopancreatic necrosis disease.

机构信息

Department of Food Science and Biotechnology, College of BioNano Technology, Gachon University, Seongnam, 13120, Republic of Korea.

Division of Animal and Dairy Sciences, College of Agriculture and Life Science, Chungnam National University, Daejeon, 34134, Republic of Korea.

出版信息

Arch Virol. 2024 Sep 11;169(10):196. doi: 10.1007/s00705-024-06121-4.

Abstract

Vibrio parahaemolyticus is a major seafood-borne zoonotic pathogen that causes gastroenteritis in humans and acute hepatopancreatic necrosis disease (AHPND) in shrimp. In this study, we isolated and characterized Vibrio phage vB_VpM-pA2SJ1, which infects clinical and AHPND-associated strains of V. parahaemolyticus. The phage genome is a linear dsDNA 51,054 bp in length with a G + C content of 43.7%, and it contains 89 open reading frames. Genome comparisons revealed basal similarity to other Vibrio phages, particularly Vibrio phage vB_VpP_1, with 84.2% identity and 46% coverage. Phylogenetic analysis based on the whole genome, the terminase large subunit, and the major capsid protein revealed that phage vB_VpM-pA2SJ1 did not cluster with other known phage families, thus indicating its uniqueness.

摘要

副溶血弧菌是一种主要的食源性人畜共患病病原体,可导致人类肠胃炎和虾类急性肝胰腺坏死病 (AHPND)。在本研究中,我们分离并鉴定了感染副溶血弧菌临床株和 AHPND 相关株的噬菌体 vB_VpM-pA2SJ1。噬菌体基因组是一条长 51054 bp 的线性 dsDNA,GC 含量为 43.7%,包含 89 个开放阅读框。基因组比较显示与其他弧菌噬菌体具有基础相似性,特别是与副溶血弧菌噬菌体 vB_VpP_1 的同源性为 84.2%,覆盖度为 46%。基于全基因组、末端酶大亚基和主要衣壳蛋白的系统发育分析表明,噬菌体 vB_VpM-pA2SJ1 与其他已知噬菌体家族没有聚类,因此表明其独特性。

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