Department of Respiratory and Critical Care Medicine, Affiliated Hospital of Guangdong Medical University, Zhanjiang, China.
Cancer Hospital, Affiliated Hospital of Guangdong Medical University, Zhanjiang, China.
Medicine (Baltimore). 2024 May 31;103(22):e38322. doi: 10.1097/MD.0000000000038322.
Recent studies have found that ferroptosis-related genes (FRGs) have broad applications in tumor therapy. However, the predictive potential of these genes in lung adenocarcinoma (LUAD) remains to be fully characterized. We aimed to investigate the FRGs that might be potential targets for LUAD.
We screened the RNA sequencing samples from LUAD patients from the GEO database and analyzed the ferroptosis-related differentially expressed genes (DEGs). A functional analysis of DEGs was performed. The risk model was constructed to evaluation and validation FRGs. We explored the immune landscape of LUAD and controls. The value of FRGs in diagnosing LUAD was tested in the GSE30219, GSE37745, GSE0081 datasets, and qPCR was used to verify their diagnostic value in LUAD patients in our hospital.
A total of 1327 DEGs in quantitative proteomics were obtained, of which ferroptosis-related DEGs were 259. Enrichment analysis showed significant enrichment in the absorption and metabolism of fatty acids and arachidonic acid. The upregulated genes (GCLC, RRM2, AURKA, SLC7A5, and SLC2A1) and downregulated genes (ANGPTL7, ALOX15, ALOX15B, HSD17B11, IL33, TSC22D3, and DUOX1) were selected as core genes in tissue samples from 62 patients by qPCR. DUOX1 and HSD17B11 were obtained by bioinformatics analysis, both of which showed similar expression trends at the RNA and protein levels. The Kaplan-Meier method showed that DUOX1 and HSD17B11 were closely related to the overall survival (OS) of LUAD patients.
Ferroptosis-related genes DUOX1 and HSD17B11 are of considerable value in the diagnosis of LUAD patients. Their low expression suggests an increased recurrence rate and leads to a decrease in the patient quality of life.
最近的研究发现,铁死亡相关基因(FRGs)在肿瘤治疗中有广泛的应用。然而,这些基因在肺腺癌(LUAD)中的预测潜力仍有待充分描述。我们旨在研究可能成为 LUAD 潜在靶点的 FRGs。
我们从 GEO 数据库中筛选 LUAD 患者的 RNA 测序样本,并分析铁死亡相关差异表达基因(DEGs)。对 DEGs 进行功能分析。构建风险模型以评估和验证 FRGs。我们探索了 LUAD 和对照的免疫景观。在 GSE30219、GSE37745、GSE0081 数据集以及 qPCR 中测试 FRGs 诊断 LUAD 的价值,并在我院 LUAD 患者中验证其诊断价值。
定量蛋白质组学中获得了 1327 个 DEGs,其中铁死亡相关 DEGs 为 259 个。富集分析显示,在脂肪酸和花生四烯酸的吸收和代谢中存在显著富集。通过 qPCR 在 62 例患者的组织样本中选择上调基因(GCLC、RRM2、AURKA、SLC7A5 和 SLC2A1)和下调基因(ANGPTL7、ALOX15、ALOX15B、HSD17B11、IL33、TSC22D3 和 DUOX1)作为核心基因。通过生物信息学分析获得 DUOX1 和 HSD17B11,它们在 RNA 和蛋白质水平上均显示出相似的表达趋势。Kaplan-Meier 方法显示,DUOX1 和 HSD17B11 与 LUAD 患者的总生存期(OS)密切相关。
铁死亡相关基因 DUOX1 和 HSD17B11 在 LUAD 患者的诊断中有重要价值。它们的低表达表明复发率增加,导致患者生活质量下降。