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来自越南的红藻哈维藻(Harvey 1860)(江蓠目:江蓠科)线粒体全基因组的特征分析与系统发育分析

Characterization and phylogenetic analysis of the complete mitochondrial genome of the red alga, Harvey 1860 (Gracilariales: Gracilariaceae) from Vietnam.

作者信息

Nguyen Tu Van, Duc Luong Thien, Thi Le Trang, Lee Dae-Sung, Yoon Moongeun, Kim Keun-Yong, Tran Biet Thanh, Woo Jiyoung

机构信息

Department of Ecology, Institute of Tropical Biology, Vietnam Academy of Science and Technology, Ho Chi Minh, Vietnam.

National Marine Biodiversity Institute of Korea, Seocheon, Republic of Korea.

出版信息

Mitochondrial DNA B Resour. 2024 Sep 9;9(9):1196-1200. doi: 10.1080/23802359.2024.2399925. eCollection 2024.

DOI:10.1080/23802359.2024.2399925
PMID:39263683
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11389640/
Abstract

The marine red alga, , is economically significant for its agar production and pharmacologically active compounds. This study reveals its complete mitochondrial genome (mitogenome), sequenced using Illumina's next-generation technology. The mitogenome is a 25,909 bp circular molecule with a G + C content of 27.21%, comprising 24 protein-coding genes, two ribosomal RNA genes, 24 transfer RNA genes, and one open reading frame (ORF) with an unidentified function. Both gene structure and composition are highly conserved within . The phylogenetic analyses fully support a close relationship of with other species, as well as its sister relationship with . This mitogenome sequencing effort of provides crucial data for future phylogenetic research on marine red algae.

摘要

海洋红藻,因其琼脂生产和药理活性化合物而具有重要的经济意义。本研究揭示了其完整的线粒体基因组(线粒体基因组),该基因组是使用Illumina的下一代技术进行测序的。线粒体基因组是一个25,909 bp的环状分子,G + C含量为27.21%,包含24个蛋白质编码基因、两个核糖体RNA基因、24个转运RNA基因和一个功能未知的开放阅读框(ORF)。在该红藻内部,基因结构和组成都高度保守。系统发育分析充分支持该红藻与其他红藻物种的密切关系,以及它与另一红藻的姐妹关系。对该红藻的线粒体基因组测序工作为未来海洋红藻的系统发育研究提供了关键数据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/abac/11389640/7b06f4c5464b/TMDN_A_2399925_F0003_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/abac/11389640/96cb058df1c1/TMDN_A_2399925_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/abac/11389640/c34200839081/TMDN_A_2399925_F0002_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/abac/11389640/7b06f4c5464b/TMDN_A_2399925_F0003_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/abac/11389640/96cb058df1c1/TMDN_A_2399925_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/abac/11389640/c34200839081/TMDN_A_2399925_F0002_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/abac/11389640/7b06f4c5464b/TMDN_A_2399925_F0003_B.jpg

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Organellar genomics: a useful tool to study evolutionary relationships and molecular evolution in Gracilariaceae (Rhodophyta).细胞器基因组学:研究江蓠科(红藻门)进化关系和分子进化的有用工具。
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Complete Mitochondrial Genome of and Identification of Molecular Markers for the Oomycetes.
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Complete mitochondrial genome of agar-producing red alga Gracilariopsis chorda (Gracilariales).产琼脂红藻缢江蓠(江蓠目)的完整线粒体基因组
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