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Tn ICE 家族的进化:-介导的货物基因上调和水平转移的协调。

Evolution of the Tn ICE family: -mediated coordination of cargo gene upregulation and horizontal transfer.

机构信息

Department of Molecular and Chemical Life Sciences, Graduate School of Life Sciences, Tohoku University, Sendai, Japan.

出版信息

Microbiol Spectr. 2024 Oct 3;12(10):e0060724. doi: 10.1128/spectrum.00607-24. Epub 2024 Sep 12.

DOI:10.1128/spectrum.00607-24
PMID:39264161
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11448139/
Abstract

ICETn carries a operon for the mineralization of polychlorinated biphenyls (PCBs)/biphenyl and belongs to the Tn ICE (integrative and conjugative element) family. In this study, we investigated the role of the gene in ICE transfer. The gene encodes a LysR-type transcriptional regulator, which is conserved in sequence, positioning, and directional orientation among Tn family ICEs. The belongs to the operon, and its overexpression on solid medium resulted in modest upregulation of (threefold), marked upregulation of (80-fold), enhanced ICE excision and, most notably, ICE transfer frequency. We propose the evolutional roles of , which upon insertion to its current position, might have connected the cargo gene activation and ICE transfer. This property of ICE, i.e., undergoing transfer under environmental conditions that lead to cargo gene activation, would instantly confer fitness advantages to bacteria newly acquiring this ICE, thereby resulting in efficient dissemination of the Tn family ICEs.IMPORTANCEOnly ICETn is proven to transfer among the widely disseminating Tn family integrative and conjugative elements (ICEs) from β and γ-proteobacteria. We showed that the gene in ICETn, which is conserved in the ICE family with fixed location and direction, is co-transcribed with the cargo gene and activates ICE transfer. We propose that capturing of by an ancestral ICE to the current position established the Tn family of ICEs. Our findings provide insights into the evolutionary processes that led to the widespread distribution of the Tn family of ICEs across bacterial species.

摘要

ICE Tn 携带一个操纵子,用于多氯联苯 (PCBs)/联苯的矿化,属于 Tn ICE(整合和共轭元件)家族。在这项研究中,我们研究了 基因在 ICE 转移中的作用。 基因编码一个 LysR 型转录调节因子,在 Tn 家族 ICE 中序列、位置和方向上都保守。 属于 操纵子,其在固体培养基上的过表达导致 (三倍)适度上调, (80 倍)显著上调,ICE 切除增强,最值得注意的是,ICE 转移频率增强。我们提出了 的进化作用,它在插入到当前位置时,可能连接了货物基因的激活和 ICE 转移。这种 ICE 的特性,即在导致货物基因激活的环境条件下进行转移,会立即为新获得此 ICE 的细菌赋予适应性优势,从而导致 Tn 家族 ICE 高效传播。

重要性

只有 ICETn 被证明可以在β和γ变形菌中广泛传播的 Tn 家族整合和共轭元件 (ICE) 之间转移。我们表明,ICETn 中的 基因在 ICE 家族中具有固定的位置和方向,与货物基因共转录,并激活 ICE 转移。我们提出,祖先 ICE 捕获 到当前位置建立了 Tn 家族的 ICE。我们的研究结果为导致 Tn 家族 ICE 在细菌物种中广泛分布的进化过程提供了深入了解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26d0/11448139/320f251ea7e0/spectrum.00607-24.f008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26d0/11448139/b1f94478de5e/spectrum.00607-24.f001.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26d0/11448139/320f251ea7e0/spectrum.00607-24.f008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26d0/11448139/b1f94478de5e/spectrum.00607-24.f001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26d0/11448139/26351093660a/spectrum.00607-24.f002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26d0/11448139/6f77739c2761/spectrum.00607-24.f003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26d0/11448139/395bfb5453b7/spectrum.00607-24.f004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26d0/11448139/b06bf9c16780/spectrum.00607-24.f005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26d0/11448139/b804d316f9c5/spectrum.00607-24.f006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26d0/11448139/d3a8f802d2ae/spectrum.00607-24.f007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26d0/11448139/320f251ea7e0/spectrum.00607-24.f008.jpg

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