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衰减全反射傅里叶变换红外光谱在诊断和特征化心脏淀粉样变性中的应用的初步研究。

Pilot Study on the Use of Attenuated Total Reflectance-Fourier Transform Infrared Spectroscopy for Diagnosing and Characterizing Cardiac Amyloidosis.

机构信息

Department of Nephrology, Ghent University Hospital, 9000 Ghent, Belgium.

Department of Pathology, Ghent University Hospital, 9000 Ghent, Belgium.

出版信息

Int J Mol Sci. 2024 Aug 29;25(17):9358. doi: 10.3390/ijms25179358.

Abstract

Amyloidosis diagnosis relies on Congo red staining with immunohistochemistry and immunofluorescence for subtyping but lacks sensitivity and specificity. Laser-microdissection mass spectroscopy offers better accuracy but is complex and requires extensive sample preparation. Attenuated total reflectance-Fourier transform infrared (ATR-FTIR) spectroscopy offers a promising alternative for amyloidosis characterization. Cardiac tissue sections from nine patients with amyloidosis and 20 heart transplant recipients were analyzed using ATR-FTIR spectroscopy. Partial least squares discriminant analysis (PLS-DA), principal component analysis (PCA), and hierarchical cluster analysis (HCA) models were used to differentiate healthy post-transplant cardiac tissue from amyloidosis samples and identify amyloidosis subtypes [κ light chain ( = 1), λ light chain ( = 3), and transthyretin ( = 5)]. Leave-one-out cross-validation (LOOCV) was employed to assess the performance of the PLS-DA model. Significant spectral differences were found in the 1700-1500 cm and 1300-1200 cm regions, primarily related to proteins. The PLS-DA model explained 85.8% of the variance, showing clear clustering between groups. PCA in the 1712-1711 cm, 1666-1646 cm, and 1385-1383 cm regions also identified two clear clusters. The PCA and the HCA model in the 1646-1642 cm region distinguished κ light chain, λ light chain, and transthyretin cases. This pilot study suggests ATR-FTIR spectroscopy as a novel, non-destructive, rapid, and inexpensive tool for diagnosing and subtyping amyloidosis. This study was limited by a small dataset and variability in measurements across different instruments and laboratories. The PLS-DA model's performance may suffer from overfitting and class imbalance. Larger, more diverse datasets are needed for validation.

摘要

淀粉样变的诊断依赖于刚果红染色结合免疫组化和免疫荧光进行亚型分类,但缺乏敏感性和特异性。激光微切割质谱分析提供了更好的准确性,但复杂且需要广泛的样本制备。衰减全反射-傅里叶变换红外(ATR-FTIR)光谱分析为淀粉样变特征提供了一种很有前途的替代方法。使用 ATR-FTIR 光谱分析了 9 例淀粉样变患者和 20 例心脏移植受者的心脏组织切片。采用偏最小二乘判别分析(PLS-DA)、主成分分析(PCA)和层次聚类分析(HCA)模型来区分健康的移植后心脏组织与淀粉样变样本,并鉴定淀粉样变亚型[κ 轻链( = 1)、λ 轻链( = 3)和转甲状腺素( = 5)]。采用留一法交叉验证(LOOCV)评估 PLS-DA 模型的性能。在 1700-1500 cm 和 1300-1200 cm 区域发现了显著的光谱差异,主要与蛋白质有关。PLS-DA 模型解释了 85.8%的方差,显示出组间明显的聚类。在 1712-1711 cm、1666-1646 cm 和 1385-1383 cm 区域的 PCA 也确定了两个明显的聚类。在 1646-1642 cm 区域的 PCA 和 HCA 模型区分了 κ 轻链、λ 轻链和转甲状腺素病例。这项初步研究表明,ATR-FTIR 光谱分析是一种新颖、非破坏性、快速且廉价的诊断和淀粉样变亚型分类工具。本研究受到数据集小、不同仪器和实验室之间测量值的变异性以及 PLS-DA 模型可能因过度拟合和类不平衡而性能下降的限制。需要更大、更多样化的数据集进行验证。

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