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极地土壤是乳杆菌属乳酸菌的新型蕴藏库。

Polar-Region Soils as Novel Reservoir of Lactic Acid Bacteria from the Genus .

机构信息

Institute of Biochemistry and Biophysics, Polish Academy of Sciences, 02-106 Warsaw, Poland.

出版信息

Int J Mol Sci. 2024 Aug 30;25(17):9444. doi: 10.3390/ijms25179444.

Abstract

Polar habitats offer excellent sites to isolate unique bacterial strains due to their diverse physical, geochemical, and biological factors. We hypothesize that the unique environmental conditions of polar regions select for distinct strains of lactic acid bacteria (LAB) with novel biochemical properties. In this study, we characterized ten strains of psychrotrophic LAB isolated from hitherto poorly described sources-High Arctic and maritime Antarctic soils and soil-like materials, including ornithogenic soils, cryoconites, elephant seal colonies, and postglacial moraines. We evaluated the physiological and biochemical properties of the isolates. Based on 16S rRNA and housekeeping genes, the four LAB strains were assigned to three species: , , and . The remaining strains may represent three new species of the genus. All isolates were neutrophilic and halophilic psychrotrophs capable of fermenting various carbohydrates, organic acids, and alcohols. The identified metabolic properties of the isolated strains suggest possible syntrophic interactions with other microorganisms in polar habitats. Some showed antimicrobial activity against food pathogens such as and human pathogens like spp. Several isolates exhibited unique metabolic traits with potential biotechnological applications that could be more effectively exploited under less stringent technological conditions compared to thermophilic LAB strains, such as lower temperatures and reduced nutrient concentrations. Analysis of extrachromosomal genetic elements revealed 13 plasmids ranging from 4.5 to 79.5 kb in five isolates, featuring unique genetic structures and high levels of previously uncharacterized genes. This work is the first comprehensive study of the biochemical properties of both known and new species and enhances our understanding of bacterial communities in harsh and highly selective polar soil ecosystems.

摘要

极地生境因其多样的物理、地球化学和生物因素,提供了分离独特细菌菌株的绝佳场所。我们假设极地独特的环境条件选择了具有新颖生化特性的独特乳酸菌(LAB)菌株。在这项研究中,我们从以前描述较少的极地来源——高极和海洋南极土壤和类似土壤的物质,包括鸟粪土、冰核、象海豹聚居地和冰后冰碛,分离并鉴定了 10 株嗜冷 LAB 菌株。我们评估了分离株的生理生化特性。基于 16S rRNA 和看家基因,将 4 株 LAB 菌株分配到 3 个种: 、 和 。其余菌株可能代表 属的三个新种。所有分离株均为嗜中性和嗜盐性嗜冷菌,能够发酵各种碳水化合物、有机酸和醇类。鉴定的分离株代谢特性表明它们可能与极地生境中的其他微生物存在共生关系。一些菌株对食源性病原体如 和人源性病原体如 spp. 具有抗菌活性。一些分离株具有独特的代谢特征,具有潜在的生物技术应用价值,与嗜热 LAB 菌株相比,在较不严格的技术条件下(如较低的温度和减少的营养浓度)可以更有效地利用这些特征。对染色体外遗传元件的分析显示,在五个分离株中发现了 13 个质粒,大小从 4.5 到 79.5kb,具有独特的遗传结构和高水平的以前未表征的基因。这项工作是对已知和新 种的生化特性的首次全面研究,增强了我们对苛刻且高度选择性的极地土壤生态系统中细菌群落的理解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a61b/11395011/539b3907e9c8/ijms-25-09444-g001.jpg

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