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用于鉴别肿瘤性和非肿瘤性结肠黏膜相关淋巴组织肿瘤的拉曼光谱分析

Raman spectroscopy for classification of neoplastic and non-neoplastic CAM colon tumors.

作者信息

Esteves B, Pimenta S, Maciel M J, Costa M, Baltazar F, Cerqueira M F, Alpuim P, Silva C A, Correia J H

机构信息

CMEMS-UMinho, Department of Industrial Electronics, University of Minho, Guimarães, Portugal.

LABBELS - Associate Laboratory, Braga, Guimarães, Portugal.

出版信息

Heliyon. 2024 Aug 28;10(17):e36981. doi: 10.1016/j.heliyon.2024.e36981. eCollection 2024 Sep 15.

DOI:10.1016/j.heliyon.2024.e36981
PMID:39281487
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11402221/
Abstract

This paper demonstrates the potential of Raman spectroscopy for differentiating neoplastic from non-neoplastic colon tumors, obtained with the CAM (chicken chorioallantoic membrane) model. For the CAM model two human cell lines were used to generate two types of tumors, the RKO cell line for neoplastic colon tumors and the NCM460 cell line for non-neoplastic colon tumors. The Raman spectra were acquired with a 785 nm excitation laser. The measured Raman spectra from the CAM samples ( = 14) were processed with several methods for baseline correction and to remove artifacts. The corrected spectra were analyzed with PCA (principal component analysis). Additionally, machine learning based algorithms were used to create a model capable of classifying neoplastic and non-neoplastic tumors. The principal component scores showed a clear differentiation between neoplastic and non-neoplastic colon tumors. The classification model had an accuracy of 93 %. Thus, a complete methodology to process and analyze Raman spectra was validated, using a rapid, accessible, and well-established tumor model that mimics the human tumor pathology with minor ethical concerns.

摘要

本文展示了拉曼光谱法在鉴别肿瘤性与非肿瘤性结肠肿瘤方面的潜力,该研究是通过鸡胚绒毛尿囊膜(CAM)模型获得的。对于CAM模型,使用了两种人类细胞系来生成两种类型的肿瘤,用于肿瘤性结肠肿瘤的RKO细胞系和用于非肿瘤性结肠肿瘤的NCM460细胞系。拉曼光谱是用785nm激发激光采集的。对来自CAM样本(n = 14)的测量拉曼光谱采用了几种方法进行基线校正和去除伪影。对校正后的光谱进行主成分分析(PCA)。此外,基于机器学习的算法被用于创建一个能够区分肿瘤性和非肿瘤性肿瘤的模型。主成分得分显示肿瘤性和非肿瘤性结肠肿瘤之间有明显差异。分类模型的准确率为93%。因此,使用一个快速、可及且成熟的肿瘤模型,在伦理问题较少的情况下模拟人类肿瘤病理学,验证了一种处理和分析拉曼光谱的完整方法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8c3/11402221/716fdf9fdb94/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8c3/11402221/9b33f05bc35b/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8c3/11402221/a7bde4e937f3/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8c3/11402221/2a8beae510b9/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8c3/11402221/7f081009fc2a/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8c3/11402221/c74702051848/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8c3/11402221/716fdf9fdb94/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8c3/11402221/9b33f05bc35b/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8c3/11402221/a7bde4e937f3/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8c3/11402221/2a8beae510b9/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8c3/11402221/7f081009fc2a/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8c3/11402221/c74702051848/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8c3/11402221/716fdf9fdb94/gr6.jpg

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本文引用的文献

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Simulation of the process of angiogenesis: Quantification and assessment of vascular patterning in the chicken chorioallantoic membrane.模拟血管生成过程:鸡胚绒毛尿囊膜血管模式的定量评估。
Comput Biol Med. 2021 Sep;136:104647. doi: 10.1016/j.compbiomed.2021.104647. Epub 2021 Jul 12.
2
Non-invasive diagnosis of colorectal cancer by Raman spectroscopy: Recent developments in liquid biopsy and endoscopy approaches.基于拉曼光谱的结直肠癌无创诊断:液体活检和内镜方法的最新进展。
Spectrochim Acta A Mol Biomol Spectrosc. 2021 Sep 5;258:119818. doi: 10.1016/j.saa.2021.119818. Epub 2021 Apr 16.
3
Monitoring of tumor growth and vascularization with repetitive ultrasonography in the chicken chorioallantoic-membrane-assay.
利用重复性超声检查监测鸡胚绒毛尿囊膜实验中的肿瘤生长和血管生成。
Sci Rep. 2020 Oct 29;10(1):18585. doi: 10.1038/s41598-020-75660-y.
4
Distinguishing metastatic triple-negative breast cancer from nonmetastatic breast cancer using second harmonic generation imaging and resonance Raman spectroscopy.使用二次谐波成像和共振拉曼光谱区分转移性三阴性乳腺癌与非转移性乳腺癌。
J Biophotonics. 2020 Jul;13(7):e202000005. doi: 10.1002/jbio.202000005. Epub 2020 Apr 20.
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Detection of prostate cancer by Raman spectroscopy: A multivariate study on patients with normal and altered PSA values.基于 PSA 值正常和异常的患者的多变量研究:拉曼光谱检测前列腺癌。
J Photochem Photobiol B. 2020 Mar;204:111801. doi: 10.1016/j.jphotobiol.2020.111801. Epub 2020 Jan 18.
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Analysis of Human Colon by Raman Spectroscopy and Imaging-Elucidation of Biochemical Changes in Carcinogenesis.拉曼光谱和成像分析人类结肠-阐明癌变中的生化变化。
Int J Mol Sci. 2019 Jul 10;20(14):3398. doi: 10.3390/ijms20143398.
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A high-throughput serum Raman spectroscopy platform and methodology for colorectal cancer diagnostics.用于结直肠癌诊断的高通量血清拉曼光谱平台和方法。
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The molecular cues for the biological effects of ionizing radiation dose and post-irradiation time on human breast cancer SKBR3 cell line: A Raman spectroscopy study.电离辐射剂量和辐照后时间对人乳腺癌 SKBR3 细胞系生物学效应的分子线索:拉曼光谱研究。
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