Cheng Yijia, Kreutzberger Mark A B, Han Jianting, Egelman Edward H, Cao Qin
Bio-X Institutes, Key Laboratory for the Genetics of Developmental and Neuropsychiatric Disorders, Ministry of Education, Shanghai Jiao Tong University, Shanghai, 200030, China.
Department of Biochemistry and Molecular Genetics, University of Virginia School of Medicine, Charlottesville, VA, 22903, USA.
Nat Commun. 2024 Sep 16;15(1):8091. doi: 10.1038/s41467-024-52422-2.
Protein filaments are ubiquitous in nature and have diverse biological functions. Cryo-electron microscopy (cryo-EM) enables the determination of atomic structures, even from native samples, and is capable of identifying previously unknown filament species through high-resolution cryo-EM maps. In this study, we determine the structure of an unreported filament species from a cryo-EM dataset collected from Bacillus amyloiquefaciens biofilms. These filaments are composed of GerQ, a spore coat protein known to be involved in Bacillus spore germination. GerQ assembles into a structurally stable architecture consisting of rings containing nine subunits, which stacks to form filaments. Molecular dockings and model predictions suggest that this nine-subunit structure is suitable for binding CwlJ, a protein recruited by GerQ and essential for Ca-DPA induced spore germination. While the assembly state of GerQ within the spores and the direct interaction between GerQ and CwlJ have yet to be validated through further experiments, our findings provide valuable insights into the self-assembly of GerQ and enhance our understanding of its role in spore germination.
蛋白质丝在自然界中无处不在,具有多种生物学功能。冷冻电子显微镜(cryo-EM)能够确定原子结构,甚至可以从天然样品中确定,并且能够通过高分辨率冷冻电镜图谱识别以前未知的丝状物种。在这项研究中,我们从解淀粉芽孢杆菌生物膜收集的冷冻电镜数据集中确定了一种未报道的丝状物种的结构。这些细丝由GerQ组成,GerQ是一种已知参与芽孢杆菌孢子萌发的芽孢衣蛋白。GerQ组装成一种结构稳定的结构,由包含九个亚基的环组成,这些环堆叠形成细丝。分子对接和模型预测表明,这种九个亚基的结构适合结合CwlJ,CwlJ是一种由GerQ招募的蛋白质,对钙二磷酸(Ca-DPA)诱导的孢子萌发至关重要。虽然GerQ在孢子内的组装状态以及GerQ与CwlJ之间的直接相互作用尚未通过进一步实验得到验证,但我们的发现为GerQ的自组装提供了有价值的见解,并增强了我们对其在孢子萌发中作用的理解。