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用生物信息学和网络药理学阐明 2 型糖尿病影响非酒精性脂肪性肝炎进展的分子机制:综述。

Elucidation of the molecular mechanism of type 2 diabetes mellitus affecting the progression of nonalcoholic steatohepatitis using bioinformatics and network pharmacology: A review.

机构信息

Department of Pharmacy, Jinling Hospital, Affiliated Hospital of Medical School, Nanjing University, Nanjing, China.

The fourth was assigned to the outpatient department, Jinling Hospital, Affiliated Hospital of Medical School, Nanjing University, Nanjing, China.

出版信息

Medicine (Baltimore). 2024 Sep 13;103(37):e39731. doi: 10.1097/MD.0000000000039731.

Abstract

Increasing evidence suggests that patients with diabetes are at increased risk of developing nonalcoholic steatohepatitis (NASH), but the underlying mechanisms that affect the progression of NASH remain unclear. In this study, we used bioinformatics and network pharmacology methods to explore the differentially expressed genes of NASH and the related genes of type 2 diabetes mellitus, and a total of 46 common targets were obtained. Gene ontology showed that the common targets were mainly involved in biological processes such as glucocorticoid, hormone, and bacterium responses. The Kyoto Encyclopedia of Genes and Genomes enrichment analysis signal pathways were mainly in colorectal cancer, amphetamine addition, the peroxisome proliferator-activated receptor signaling pathway, and the toll-like receptor signaling pathway. The protein-protein interaction network identified 8 hub genes, and the co-expression network was analyzed to obtain 7 related functions and mutual proportions of hub genes. A total of 120 transcription factors were predicted for hub genes. Hub genes were closely related to immune cells, including neutropils and eosinophils. In addition, we identified 15 potential candidate drugs based on hub genes that are promising for the treatment of NASH. Type 2 diabetes mellitus can affect the progression of NASH by changing hormone levels and inflammatory responses through multiple targets and signaling pathways. Eight hub genes are expected to be potential targets for subsequent treatment.

摘要

越来越多的证据表明,糖尿病患者发生非酒精性脂肪性肝炎(NASH)的风险增加,但影响 NASH 进展的潜在机制尚不清楚。在这项研究中,我们使用生物信息学和网络药理学方法来探索 NASH 的差异表达基因和 2 型糖尿病的相关基因,共获得了 46 个共同靶点。基因本体论表明,这些共同靶点主要涉及生物过程,如糖皮质激素、激素和细菌反应。京都基因与基因组百科全书富集分析信号通路主要集中在结直肠癌、安非他命加合物、过氧化物酶体增殖物激活受体信号通路和 Toll 样受体信号通路。蛋白质-蛋白质相互作用网络确定了 8 个枢纽基因,共表达网络分析获得了 7 个相关功能和枢纽基因的相互比例。共预测了 120 个枢纽基因的转录因子。枢纽基因与免疫细胞密切相关,包括中性粒细胞和嗜酸性粒细胞。此外,我们还基于枢纽基因鉴定了 15 种有希望治疗 NASH 的潜在候选药物。2 型糖尿病可通过改变激素水平和炎症反应,通过多个靶点和信号通路影响 NASH 的进展。8 个枢纽基因有望成为后续治疗的潜在靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0403/11404948/57ae97ecb8e0/medi-103-e39731-g001.jpg

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