Suppr超能文献

趋化因子 (C-X-C 基元) 配体 9、白细胞介素 2 受体亚基 β 和分泌磷蛋白 1,动脉粥样硬化和非酒精性脂肪性肝炎合并症模式中的潜在诊断生物标志物。

CXCL9, IL2RB, and SPP1, potential diagnostic biomarkers in the co-morbidity pattern of atherosclerosis and non-alcoholic steatohepatitis.

机构信息

Liaoning University of Traditional Chinese Medicine, No. 79 Chongshan East Road, Huanggu District, Shenyang, 110847, Liaoning, China.

Nantong Hospital of Traditional Chinese Medicine, Nantong Hospital Affiliated to Nanjing University of Chinese Medicine, Nantong, 226000, Jiangsu, China.

出版信息

Sci Rep. 2024 Jul 16;14(1):16364. doi: 10.1038/s41598-024-66287-4.

Abstract

Non-alcoholic steatohepatitis (NASH) is a hepatocyte inflammation based on hepatocellular steatosis, yet there is no effective drug treatment. Atherosclerosis (AS) is caused by lipid deposition in the endothelium, which can lead to various cardiovascular diseases. NASH and AS share common risk factors, and NASH can also elevate the risk of AS, causing a higher morbidity and mortality rate for atherosclerotic heart disease. Therefore, timely detection and diagnosis of NASH and AS are particularly important. In this study, differential gene expression analysis and weighted gene co-expression network analysis were performed on the AS (GSE100927) and NASH (GSE89632) datasets to obtain common crosstalk genes, respectively. Then, candidate Hub genes were screened using four topological algorithms and externally validated in the GSE43292 and GSE63067 datasets to obtain Hub genes. Furthermore, immune infiltration analysis and gene set variation analysis were performed on the Hub genes to explore the underlying mechanisms. The DGIbd database was used to screen candidate drugs for AS and NASH. Finally, a NASH model was constructed using free fatty acid-induced human L02 cells, an AS model was constructed using lipopolysaccharide-induced HUVECs, and a co-morbidity model was constructed using L02 cells and HUVECs to verify Hub gene expression. The result showed that a total of 113 genes common to both AS and NASH were identified as crosstalk genes, and enrichment analysis indicated that these genes were mainly involved in the regulation of immune and metabolism-related pathways. 28 candidate Hub genes were screened according to four topological algorithms, and CXCL9, IL2RB, and SPP1 were identified as Hub genes after in vitro experiments and external dataset validation. The ROC curves and SVM modeling demonstrated the good diagnostic efficacy of these three Hub genes. In addition, the Hub genes are strongly associated with immune cell infiltration, especially macrophages and γ-δ T cell infiltration. Finally, five potential therapeutic drugs were identified. has-miR-185 and hsa-miR-335 were closely related to AS and NASH. This study demonstrates that CXCL9, IL2RB, and SPP1 may serve as potential biomarkers for the diagnosis of the co-morbidity patterns of AS and NASH and as potential targets for drug therapy.

摘要

非酒精性脂肪性肝炎(NASH)是一种基于肝细胞脂肪变性的肝细胞炎症,但目前尚无有效的药物治疗方法。动脉粥样硬化(AS)是由于脂质在内皮中的沉积引起的,可导致各种心血管疾病。NASH 和 AS 有共同的危险因素,NASH 也会增加 AS 的风险,导致动脉粥样硬化性心脏病的发病率和死亡率更高。因此,及时发现和诊断 NASH 和 AS 尤为重要。本研究对 AS(GSE100927)和 NASH(GSE89632)数据集进行差异基因表达分析和加权基因共表达网络分析,分别获得共同的串扰基因。然后,使用四种拓扑算法筛选候选 Hub 基因,并在 GSE43292 和 GSE63067 数据集进行外部验证,获得 Hub 基因。进一步对 Hub 基因进行免疫浸润分析和基因集变异分析,探讨其潜在机制。使用 DGIbd 数据库筛选 AS 和 NASH 的候选药物。最后,采用游离脂肪酸诱导人 L02 细胞建立 NASH 模型,脂多糖诱导 HUVECs 建立 AS 模型,L02 细胞和 HUVECs 共培养建立共患病模型,验证 Hub 基因表达。结果表明,共鉴定出 113 个 AS 和 NASH 共有的串扰基因,富集分析表明这些基因主要参与免疫和代谢相关途径的调节。根据四种拓扑算法筛选出 28 个候选 Hub 基因,经体外实验和外部数据集验证,CXCL9、IL2RB 和 SPP1 被鉴定为 Hub 基因。ROC 曲线和 SVM 建模表明,这三个 Hub 基因具有良好的诊断效能。此外,Hub 基因与免疫细胞浸润密切相关,尤其是巨噬细胞和γ-δ T 细胞浸润。最后,鉴定出 5 种潜在的治疗药物。hsa-miR-185 和 hsa-miR-335 与 AS 和 NASH 密切相关。本研究表明,CXCL9、IL2RB 和 SPP1 可能作为 AS 和 NASH 共患病模式诊断的潜在生物标志物和药物治疗的潜在靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b05/11252365/4f01d762d452/41598_2024_66287_Fig1_HTML.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验