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非人类动植物环境暴露非遗传继承的证据基础:基于文献计量分析的证据综合图谱

Evidence base for non-genetic inheritance of environmental exposures in non-human animals and plants: a map of evidence syntheses with bibliometric analysis.

作者信息

L Macartney Erin, M Drobniak Szymon, Nakagawa Shinichi, Lagisz Malgorzata

机构信息

Evolution and Ecology Research Centre, School of Biological, Earth and Environmental Sciences, University of New South Wales, Sydney, NSW, Australia.

Institute of Environmental Sciences, Jagiellonian University, Krakow, Poland.

出版信息

Environ Evid. 2023 Jan 6;12(1):1. doi: 10.1186/s13750-022-00290-y.

Abstract

BACKGROUND

Direct effects of parental environment (particularly mothers) on offspring have been frequently demonstrated over the last decades. More recently 'indirect' non-genetic effects of ancestral environment and environmental effects through the patriline have been observed. Such research has captured the interest of many disciplines including biomedical science, toxicology, agriculture, and ecology and evolution due to the importance of understanding environmental effects on individual and population health. Consequently, the secondary literature, aimed at synthesizing non-genetic effects has also been increasing. The non-genetic inheritance secondary literature can be as diverse as the primary literature. Thus, there is a need to 'map' the non-genetic inheritance secondary literature to understand the state of the field and move forward in filling research gaps. Here, we ask four main questions: (1) What evidence exists on the impacts of non-genetic inheritance in non-human animals and plants across disciplines within the secondary 'systematic-like' (evidence synthesis) literature (2) What are the discipline-specific research patterns and gaps? (3) How connected is the literature (i.e., shared citations within and between disciplines, and collaborations between different countries)? (4) What is the overall quality of the non-genetic inheritance SR literature?

METHODS

We systematically searched for published and grey evidence syntheses on non-genetic inheritance in non-human animals and plants. We then extracted details pertaining to research topics and assigned each article to one of five disciplines (agriculture, biomedical science, ecology and evolution, toxicology, and cross-disciplinary research). We mapped within- and between- discipline research patterns through descriptive statistics and visualizations, and conducted a bibliometric analysis of the 'connectedness' of the literature (i.e., co-citation and collaboration networks). We also conducted a critical appraisal of the included articles.

RESULTS

We show that most evidence syntheses were in biomedical science and synthesized primary literature on rats and mice. Most evidence syntheses examined 'direct' effects of ancestral environment on descendants, particularly maternal dietary effects on offspring physiology and morphology. Ecology and evolution and cross-disciplinary evidence syntheses included the most diverse range of primary literature in their articles. We also show that most evidence syntheses have at least one author affiliated with an institution in the USA, and that the UK tends to form the most multinational collaborations. Toxicology evidence syntheses were least likely to cite studies outside of its own discipline. Lastly, we show where the quality of the non-genetic inheritance systematic-like literature could be improved.

CONCLUSIONS

We have highlighted that certain areas of non-genetic inheritance are more frequently synthesised than others which may reflect a stronger interest in certain research topics at either the secondary or primary literature level. Presenting these research patterns and gaps in the literature that will not only make it easier to for researchers to understand the current state of the literature, but will also aid in bridging gaps between disciplines in the future. This will have substantial benefits for our understanding of non-genetic inheritance, with implications for many research fields, including climate change research, ecological and evolutionary theory, and understanding the effects of environmental pollutants on population health. It will also help policy makers identify relevant literature to inform policies, especially related to the negative impacts of environmental factors across generations.

摘要

背景

在过去几十年里,亲代环境(尤其是母亲的环境)对后代的直接影响已被频繁证实。最近,人们还观察到了祖先环境的“间接”非遗传效应以及通过父系遗传的环境效应。由于理解环境对个体和群体健康的影响至关重要,此类研究引起了包括生物医学、毒理学、农业以及生态学与进化等许多学科的关注。因此,旨在综合非遗传效应的二次文献也在不断增加。非遗传继承的二次文献可能与一次文献一样多样。因此,有必要对非遗传继承的二次文献进行“梳理”,以了解该领域的现状,并在填补研究空白方面取得进展。在此,我们提出四个主要问题:(1)在二次“类系统”(证据综合)文献中,关于非遗传继承在非人类动植物各学科中的影响有哪些证据?(2)特定学科的研究模式和空白是什么?(3)文献之间的关联程度如何(即学科内部和学科之间的共同引用情况,以及不同国家之间的合作情况)?(4)非遗传继承系统评价文献的整体质量如何?

方法

我们系统地检索了关于非人类动植物非遗传继承的已发表和灰色证据综合文献。然后,我们提取了与研究主题相关的详细信息,并将每篇文章归入五个学科之一(农业、生物医学、生态学与进化、毒理学以及跨学科研究)。我们通过描述性统计和可视化方法梳理学科内部和学科之间的研究模式,并对文献的“关联性”(即共引网络和合作网络)进行文献计量分析。我们还对纳入的文章进行了批判性评价。

结果

我们发现,大多数证据综合文献来自生物医学领域,且综合了关于大鼠和小鼠的一次文献。大多数证据综合文献研究了祖先环境对后代的“直接”影响,尤其是母体饮食对后代生理和形态的影响。生态学与进化以及跨学科证据综合文献在其文章中纳入的一次文献范围最为广泛。我们还发现,大多数证据综合文献至少有一位作者隶属于美国的机构,并且英国倾向于形成最多的跨国合作。毒理学证据综合文献最不可能引用本学科以外的研究。最后,我们指出了非遗传继承类系统文献质量可以改进的地方。

结论

我们强调,非遗传继承的某些领域比其他领域更频繁地被综合,这可能反映出在二次文献或一次文献层面,对某些研究主题有更强的兴趣。展示这些研究模式和文献空白不仅将使研究人员更容易理解文献的当前状态,而且还将有助于未来弥合学科之间的差距。这将对我们理解非遗传继承有重大益处,对许多研究领域都有影响,包括气候变化研究、生态和进化理论,以及理解环境污染物对群体健康的影响。这也将帮助政策制定者识别相关文献以为政策提供信息,特别是与环境因素跨代负面影响相关的政策。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/db90/11378868/39184dcb5bc7/13750_2022_290_Fig1_HTML.jpg

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