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微藻和海藻卡里诺合成酶的表达、纯化和生化特性分析。

Expression, purification, and biochemical characterization of micro- and macroalgal kainoid synthases.

机构信息

Department of Chemistry and Biochemistry, University of California, Santa Cruz, CA, United States.

Department of Chemistry and Biochemistry, University of California, Santa Cruz, CA, United States.

出版信息

Methods Enzymol. 2024;704:233-258. doi: 10.1016/bs.mie.2024.05.017. Epub 2024 Jun 18.

Abstract

Kainoid natural products are a series of potent ionotropic glutamate receptor agonists produced by a variety of divergent marine micro- and macro-algae. The key biosynthetic step in the construction of the pyrrolidine ring pharmacophore involves a unique branch of non-heme iron α-ketoglutarate dependent dioxygenases (Fe/αKGs) termed the kainoid synthases. These Fe/αKG homologs catalyze a stereoselective C-H abstraction followed by a radical carbon-carbon bond reaction to form the bioactive core on N-prenylated L-glutamic acid substrates. In this article, we describe the expression, purification, and biochemical characterization of four divergent kainoid synthases (DabC, RadC1, DsKabC, GfKabC). Furthermore, we compare and contrast their substrate preferences and product distributions, and provide some preliminary insight into how to repurpose these enzymes for whole cell biocatalysis.

摘要

卡因类天然产物是一系列由多种不同的海洋微藻和海藻产生的强效离子型谷氨酸受体激动剂。在吡咯烷环药效团的构建中,关键的生物合成步骤涉及一种独特的非血红素铁 α-酮戊二酸依赖性双加氧酶(Fe/αKGs)分支,称为卡因类合酶。这些 Fe/αKG 同源物催化立体选择性的 C-H 抽取,随后进行自由基碳-碳键反应,在 N-烯丙基化 L-谷氨酸底物上形成生物活性核心。在本文中,我们描述了四个不同的卡因类合酶(DabC、RadC1、DsKabC 和 GfKabC)的表达、纯化和生化特征。此外,我们比较和对比了它们的底物偏好和产物分布,并提供了一些初步的见解,说明如何重新利用这些酶进行全细胞生物催化。

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