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基于显式形状先验的医学图像分割学习

Learning With Explicit Shape Priors for Medical Image Segmentation.

作者信息

You Xin, He Junjun, Yang Jie, Gu Yun

出版信息

IEEE Trans Med Imaging. 2025 Feb;44(2):927-940. doi: 10.1109/TMI.2024.3469214. Epub 2025 Feb 4.

Abstract

Medical image segmentation is a fundamental task for medical image analysis and surgical planning. In recent years, UNet-based networks have prevailed in the field of medical image segmentation. However, convolutional neural networks (CNNs) suffer from limited receptive fields, which fail to model the long-range dependency of organs or tumors. Besides, these models are heavily dependent on the training of the final segmentation head. And existing methods can not well address aforementioned limitations simultaneously. Hence, in our work, we proposed a novel shape prior module (SPM), which can explicitly introduce shape priors to promote the segmentation performance of UNet-based models. The explicit shape priors consist of global and local shape priors. The former with coarse shape representations provides networks with capabilities to model global contexts. The latter with finer shape information serves as additional guidance to relieve the heavy dependence on the learnable prototype in the segmentation head. To evaluate the effectiveness of SPM, we conduct experiments on three challenging public datasets. And our proposed model achieves state-of-the-art performance. Furthermore, SPM can serve as a plug-and-play structure into classic CNNs and Transformer-based backbones, facilitating the segmentation task on different datasets. Source codes are available at https://github.com/AlexYouXin/Explicit-Shape-Priors.

摘要

医学图像分割是医学图像分析和手术规划的一项基础任务。近年来,基于UNet的网络在医学图像分割领域占据主导地位。然而,卷积神经网络(CNN)存在感受野有限的问题,无法对器官或肿瘤的长距离依赖性进行建模。此外,这些模型严重依赖于最终分割头的训练。并且现有方法无法同时很好地解决上述局限性。因此,在我们的工作中,我们提出了一种新颖的形状先验模块(SPM),它可以明确引入形状先验来提升基于UNet的模型的分割性能。明确的形状先验由全局和局部形状先验组成。前者具有粗略的形状表示,为网络提供建模全局上下文的能力。后者具有更精细的形状信息,作为额外的指导,以减轻对分割头中可学习原型的严重依赖。为了评估SPM的有效性,我们在三个具有挑战性的公共数据集上进行了实验。我们提出的模型取得了当前最优的性能。此外,SPM可以作为一种即插即用的结构应用于经典的CNN和基于Transformer的主干网络,便于在不同数据集上进行分割任务。源代码可在https://github.com/AlexYouXin/Explicit-Shape-Priors获取。

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