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生命缩聚物的水溶液起源。

On the aqueous origins of the condensation polymers of life.

机构信息

Department of Chemistry, University College London, London, UK.

出版信息

Nat Rev Chem. 2024 Nov;8(11):817-832. doi: 10.1038/s41570-024-00648-5. Epub 2024 Sep 27.

DOI:10.1038/s41570-024-00648-5
PMID:39333736
Abstract

Water is essential for life as we know it, but it has paradoxically been considered inimical to the emergence of life. Proteins and nucleic acids have sustained evolution and life for billions of years, but both are condensation polymers, suggesting that their formation requires the elimination of water. This presents intrinsic challenges at the origins of life, including how condensation polymer synthesis can overcome the thermodynamic pressure of hydrolysis in water and how nucleophiles can kinetically outcompete water to yield condensation products. The answers to these questions lie in balancing thermodynamic activation and kinetic stability. For peptides, an effective strategy is to directly harness the energy trapped in prebiotic molecules, such as nitriles, and avoid the formation of fully hydrolysed monomers. In this Review, we discuss how chemical energy can be built into precursors, retained, and released selectively for polymer synthesis. Looking to the future, the outstanding goals include how nucleic acids can be synthesized, avoiding the formation of fully hydrolysed monomers and what caused information to flow from nucleic acids to proteins.

摘要

众所周知,水是生命所必需的,但它却被认为不利于生命的出现。蛋白质和核酸已经维持了数十亿年的进化和生命,但它们都是缩合聚合物,这表明它们的形成需要排除水。这在生命起源时带来了内在的挑战,包括缩合聚合物合成如何克服水中水解的热力学压力,以及亲核试剂如何通过动力学竞争来取代水以生成缩合产物。这些问题的答案在于平衡热力学激活和动力学稳定性。对于肽来说,一种有效的策略是直接利用前生物分子(如腈)中捕获的能量,并避免完全水解单体的形成。在这篇综述中,我们讨论了如何将化学能构建到前体中,并选择性地保留和释放,以用于聚合物合成。展望未来,突出的目标包括如何合成核酸,避免完全水解单体的形成,以及是什么导致信息从核酸流向蛋白质。

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本文引用的文献

1
Constraints on the emergence of RNA through non-templated primer extension with mixtures of potentially prebiotic nucleotides.通过潜在的前生物核苷酸混合物进行无模板引物延伸对 RNA 出现的限制。
Nucleic Acids Res. 2024 Jun 10;52(10):5451-5464. doi: 10.1093/nar/gkae355.
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RNA-catalyzed evolution of catalytic RNA.催化性 RNA 的 RNA 催化进化。
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Symmetry breaking and chiral amplification in prebiotic ligation reactions.
前生物连接反应中的对称破缺和手性放大。
Nature. 2024 Feb;626(8001):1019-1024. doi: 10.1038/s41586-024-07059-y. Epub 2024 Feb 28.
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Prebiotically plausible chemoselective pantetheine synthesis in water.在水中进行具有前生物合理性的选择性泛肽合成。
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Evolution of a minimal cell.最小细胞的进化。
Nature. 2023 Aug;620(7972):122-127. doi: 10.1038/s41586-023-06288-x. Epub 2023 Jul 5.
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Selective Synthesis of Lysine Peptides and the Prebiotically Plausible Synthesis of Catalytically Active Diaminopropionic Acid Peptide Nitriles in Water.在水中选择性合成赖氨酸肽和具有催化活性的二氨基丙氨酸肽腈的前生物合理合成。
J Am Chem Soc. 2023 Feb 8;145(5):3121-3130. doi: 10.1021/jacs.2c12497. Epub 2023 Jan 26.
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A heated rock crack captures and polymerizes primordial DNA and RNA.一块受热的岩石裂缝捕获并聚合了原始的DNA和RNA。
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Prebiotic chemistry: a review of nucleoside phosphorylation and polymerization.前生物化学:核苷磷酸化和聚合反应综述。
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