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从 Sarkosyl/PAGE、交联试剂和比较建模分析中洞察肉碱/酰基辅酶 A 载体(SLC25A20)的瞬时二聚化。

Insights into Transient Dimerisation of Carnitine/Acylcarnitine Carrier (SLC25A20) from Sarkosyl/PAGE, Cross-Linking Reagents, and Comparative Modelling Analysis.

机构信息

CNR Institute of Biomembranes, Bioenergetics and Molecular Biotechnologies (IBIOM), Via Amendola 122/O, 70126 Bari, Italy.

Department of Pharmacy-Pharmaceutical Sciences, University of Bari, Via E. Orabona, 4, 70125 Bari, Italy.

出版信息

Biomolecules. 2024 Sep 14;14(9):1158. doi: 10.3390/biom14091158.

DOI:10.3390/biom14091158
PMID:39334924
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11430254/
Abstract

The carnitine/acylcarnitine carrier (CAC) is a crucial protein for cellular energy metabolism, facilitating the exchange of acylcarnitines and free carnitine across the mitochondrial membrane, thereby enabling fatty acid β-oxidation and oxidative phosphorylation (OXPHOS). Although CAC has not been crystallised, structural insights are derived from the mitochondrial ADP/ATP carrier (AAC) structures in both cytosolic and matrix conformations. These structures underpin a single binding centre-gated pore mechanism, a common feature among mitochondrial carrier (MC) family members. The functional implications of this mechanism are well-supported, yet the structural organization of the CAC, particularly the formation of dimeric or oligomeric assemblies, remains contentious. Recent investigations employing biochemical techniques on purified and reconstituted CAC, alongside molecular modelling based on crystallographic AAC dimeric structures, suggest that CAC can indeed form dimers. Importantly, this dimerization does not alter the transport mechanism, a phenomenon observed in various other membrane transporters across different protein families. This observation aligns with the ping-pong kinetic model, where the dimeric form potentially facilitates efficient substrate translocation without necessitating mechanistic alterations. The presented findings thus contribute to a deeper understanding of CAC's functional dynamics and its structural parallels with other MC family members.

摘要

肉碱/酰基辅酶 A 载体(CAC)是细胞能量代谢的关键蛋白,它促进酰基辅酶 A 和游离肉碱在线粒体膜之间的交换,从而使脂肪酸β-氧化和氧化磷酸化(OXPHOS)得以进行。尽管 CAC 尚未结晶,但从线粒体 ADP/ATP 载体(AAC)在胞质和基质构象中的结构可以推断出其结构信息。这些结构为单一结合中心门控孔机制提供了基础,该机制是线粒体载体(MC)家族成员的共同特征。该机制的功能意义得到了很好的支持,但 CAC 的结构组织,特别是二聚体或寡聚体组装的形成,仍然存在争议。最近的研究利用纯化和重组 CAC 的生化技术,以及基于结晶 AAC 二聚体结构的分子建模,表明 CAC 确实可以形成二聚体。重要的是,这种二聚化不会改变运输机制,这种现象在不同蛋白质家族的各种其他膜转运体中都有观察到。这一观察结果与乒乓动力学模型一致,其中二聚体形式可能有助于有效进行底物转运,而无需进行机制改变。因此,这些发现有助于更深入地了解 CAC 的功能动力学及其与其他 MC 家族成员的结构相似性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/218c/11430254/77d6b4e097d4/biomolecules-14-01158-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/218c/11430254/0621369a1993/biomolecules-14-01158-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/218c/11430254/93d967b3dff7/biomolecules-14-01158-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/218c/11430254/129735e08503/biomolecules-14-01158-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/218c/11430254/a2f0c89ed072/biomolecules-14-01158-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/218c/11430254/77d6b4e097d4/biomolecules-14-01158-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/218c/11430254/0621369a1993/biomolecules-14-01158-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/218c/11430254/93d967b3dff7/biomolecules-14-01158-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/218c/11430254/129735e08503/biomolecules-14-01158-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/218c/11430254/a2f0c89ed072/biomolecules-14-01158-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/218c/11430254/77d6b4e097d4/biomolecules-14-01158-g005.jpg

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