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与粉眼白貂生长和繁殖特征相关的基因组区域。

Genomic Regions Associated with Growth and Reproduction Traits in Pink-Eyed White Mink.

机构信息

Jilin Provincial Key Laboratory for Molecular Biology of Special Economic Animals, Key Laboratory of Special Economic Animal Genetic Breeding and Reproduction, Ministry of Agriculture, Institute of Special Economic Animal and Plant Sciences, The Chinese Academy of Agricultural Sciences, Changchun 130112, China.

Colleges of Animal Science, Hebei Normal University of Science and Technology, Qinhuangdao 066004, China.

出版信息

Genes (Basel). 2024 Aug 29;15(9):1142. doi: 10.3390/genes15091142.

DOI:10.3390/genes15091142
PMID:39336733
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11431770/
Abstract

In mink breeding, balanced selection for growth and reproductive features is essential because these traits are contradictory. The variables of total number born (TNB), number born alive (NBA), and body weight (BW) are highly valuable in terms of their importance in mink production. A comprehensive understanding of the molecular mechanisms that drive these features could offer vital insights into their genetic compositions. In the present study, the single-nucleotide polymorphism (SNP) genotypes of 219 minks were obtained via double digest restriction-site associated DNA sequencing (ddRAD-seq). Following several rounds of screening, about 2,415,121 high-quality SNPs were selected for a genome-wide association study (GWAS). The GWAS was used to determine BW and reproductive traits in pink-eyed white mink. It was suggested that , , and serve as potential genes for the total number of kits born (TNB), while , , , , , and are key genes for the number born alive (NBA). Moreover, , , , and are possible BW genes based on association results and available functional data from gene and mammalian phenotype databases. These results offer essential information about the variety of mink and theoretical principles for applying mink breeds.

摘要

在水貂养殖中,对生长和繁殖特征进行平衡选择至关重要,因为这些特征是相互矛盾的。总产仔数(TNB)、产活仔数(NBA)和体重(BW)这些变量在水貂生产中具有重要价值。全面了解驱动这些特征的分子机制可以为它们的遗传组成提供重要的见解。在本研究中,通过双酶切关联 DNA 测序(ddRAD-seq)获得了 219 只水貂的单核苷酸多态性(SNP)基因型。经过几轮筛选,选择了约 2415121 个高质量的 SNP 进行全基因组关联研究(GWAS)。GWAS 用于确定粉眼白貂的 BW 和繁殖性状。结果表明,、和可能是总产仔数(TNB)的潜在基因,而、、、、、是产活仔数(NBA)的关键基因。此外,根据关联结果和基因和哺乳动物表型数据库中的可用功能数据,、、、和可能是 BW 基因。这些结果为水貂品种提供了重要信息,并为水貂品种的应用提供了理论依据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c68f/11431770/a164b22ffab3/genes-15-01142-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c68f/11431770/c16623b38424/genes-15-01142-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c68f/11431770/f90476756f86/genes-15-01142-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c68f/11431770/1028d41ad42f/genes-15-01142-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c68f/11431770/736685ac4ae7/genes-15-01142-g004a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c68f/11431770/a164b22ffab3/genes-15-01142-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c68f/11431770/c16623b38424/genes-15-01142-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c68f/11431770/f90476756f86/genes-15-01142-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c68f/11431770/1028d41ad42f/genes-15-01142-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c68f/11431770/736685ac4ae7/genes-15-01142-g004a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c68f/11431770/a164b22ffab3/genes-15-01142-g005.jpg

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