School of Pharmacy, Chengdu University, 2025 Chengluo Avenue, Chengdu 610106, China.
Precision Medicine, Faculty of Health, Medicine and Life Sciences, Maastricht University, 6200 MD Maastricht, The Netherlands.
Genes (Basel). 2024 Sep 16;15(9):1210. doi: 10.3390/genes15091210.
Small Heterodimer Partner (SHP; ) is an orphan receptor that acts as a transcriptional regulator, controlling various metabolic processes, and is a potential therapeutic target for cancer. Examining the correlation between the expression of and the risk of gastric diseases could open a new path for treatment and drug development. The Gene Expression Omnibus (GEO) database was utilized to explore gene expression profiles in gastric diseases. Co-expressed genes were identified through Weighted Correlation Network Analysis (WGCNA), and GO enrichment was performed to identify potential pathways. The Xcell method was employed to analyze immune infiltration relationships. To determine the potential causal relationship between expression and gastric diseases, we identified six single-nucleotide polymorphisms (SNPs) as a proxy for expression located within 100 kilobases of and which are associated with triglyceride homeostasis and performed drug-target Mendelian randomization (MR). Bioinformatics analysis revealed that expression levels were reduced in gastric cancer and increased in gastritis. GO analysis and Gene Set Enrichment Analysis (GSEA) showed that is widely involved in oxidation-related processes. Immune infiltration analyses found that was associated with Treg. Prognostic analyses showed that a low expression of is a risk factor for the poor prognoses of gastric cancer. MR analyses revealed that expression is associated with a risk of gastric diseases ( vs. gastric cancer, = 0.006, OR: 0.073, 95%CI: 0.011-0.478; vs. gastric ulcer, = 0.03, OR: 0.991, 95%CI: 0.984-0.999; vs. other gastritis, = 0.006, OR:3.82, 95%CI: 1.468-9.942). Our study confirms the causal relationship between the expression of and the risk of gastric diseases, and highlights its role in the progression of gastric cancer. The present study opens new avenues for exploring the potential of drugs that either activate or inhibit the receptor in the treatment of gastric diseases.
小异二聚体伴侣 (SHP; ) 是一种孤儿受体,作为转录调节剂,控制各种代谢过程,是癌症的潜在治疗靶点。研究 和胃疾病风险之间的相关性可能为治疗和药物开发开辟新途径。利用基因表达综合数据库 (GEO) 探讨胃疾病中 基因表达谱。通过加权相关网络分析 (WGCNA) 鉴定共表达基因,并进行 GO 富集分析以鉴定潜在途径。采用 Xcell 方法分析免疫浸润关系。为了确定 表达与胃疾病之间的潜在因果关系,我们鉴定了六个单核苷酸多态性 (SNP) 作为 100 千碱基内与甘油三酯稳态相关并与 表达相关的替代物,并进行药物-靶标孟德尔随机化 (MR)。生物信息学分析显示,胃癌中 表达水平降低,胃炎中升高。GO 分析和基因集富集分析 (GSEA) 表明 广泛参与氧化相关过程。免疫浸润分析发现 与 Treg 相关。预后分析显示, 低表达是胃癌不良预后的危险因素。MR 分析显示, 表达与胃疾病风险相关 ( vs. 胃癌, = 0.006,OR:0.073,95%CI:0.011-0.478; vs. 胃溃疡, = 0.03,OR:0.991,95%CI:0.984-0.999; vs. 其他胃炎, = 0.006,OR:3.82,95%CI:1.468-9.942)。本研究证实了 表达与胃疾病风险之间的因果关系,并强调了其在胃癌进展中的作用。本研究为探索激活或抑制 受体的药物在胃疾病治疗中的潜力开辟了新途径。