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新种(绿藻科,绿藻门)及其细胞器基因组分析

sp. nov (Chlorellaceae, Chlorophyta) and Analysis of Its Organelle Genomes.

作者信息

Song Huiyin, Peng Hai, Fang Zhiwei, Zhang Baolong, Zhu Zhaolu, Xiao Zilan, Liu Guoxiang, Hu Yuxin

机构信息

Institute for Systems Biology, School of Life Sciences, Jianghan University, Wuhan 430056, China.

Key Laboratory of Algal Biology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China.

出版信息

Plants (Basel). 2024 Sep 18;13(18):2604. doi: 10.3390/plants13182604.

Abstract

Chlorellacean members are common in aquatic or subaerial habitats, and many of them have significant economic value. Taxonomic reports and organelle genome data for the clade, an important subgroup within this family, are limited, hindering the understanding and exploitation of this clade. In this study, a fusiform-celled strain, FACHB-3607, was isolated from a pond in China. Through examination of morphological characteristics and phylogenetic analyses of rbcL, 18S rDNA, and ITS, it was identified as a new species within the clade, named sp. nov. In addition, this study provided a first insight into the organellar genomes of the genus . The chloroplast had a 99.8 kb genome, and the mitochondrion had a 40.8 kb genome, which are moderate sizes within the clade. Phylogenomic analysis showed that is most closely related to sp. "desiccata", followed by . In contrast, was the most distantly related species. The organelle genomes of the clade display dynamic evolution, reflected in variations in genome size, gene content and order, and selection pressure. This research enhances our knowledge of species diversity and evolutionary history in the clade.

摘要

小球藻科成员在水生或气生栖息地很常见,其中许多具有重要的经济价值。该科一个重要亚群的分类学报告和细胞器基因组数据有限,这阻碍了对该亚群的理解和开发。在本研究中,从中国的一个池塘中分离出一种梭形细胞菌株FACHB - 3607。通过对形态特征的检查以及对rbcL、18S rDNA和ITS的系统发育分析,它被鉴定为该亚群内的一个新物种,命名为sp. nov。此外,本研究首次深入了解了该属的细胞器基因组。叶绿体有一个99.8 kb的基因组,线粒体有一个40.8 kb的基因组,在该亚群中属于中等大小。系统基因组分析表明,与sp. “desiccata”关系最为密切,其次是。相比之下,是关系最疏远的物种。该亚群的细胞器基因组显示出动态进化,体现在基因组大小、基因含量和顺序以及选择压力的变化上。这项研究增强了我们对该亚群物种多样性和进化历史的认识。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a955/11434904/11fbb6b91346/plants-13-02604-g001.jpg

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