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关于透明质酸作为抗菌剂的潜在活性:实验与计算验证

On the potential activity of hyaluronic acid as an antimicrobial agent: experimental and computational validations.

作者信息

Shukla Priya, Srivastava Pradeep, Mishra Abha

机构信息

School of Biochemical Engineering, Indian Institute of Technology (Banaras Hindu University), Varanasi, India.

出版信息

Bioprocess Biosyst Eng. 2025 Jan;48(1):27-42. doi: 10.1007/s00449-024-03091-4. Epub 2024 Sep 29.

DOI:10.1007/s00449-024-03091-4
PMID:39343852
Abstract

This century has seen the rise of antibiotic resistance as a significant public health problem. In addition, oxidative stress may also be a factor in selecting resistant strains of bacteria. The current study analyzed microbially produced hyaluronic acid's antibacterial activity and antioxidant activity. It had significant antibacterial action against strains of Staphylococcus aureus and Escherichia coli, with the IC value obtained being 487.65 µg mL for antioxidant assay. Our molecular docking investigations of hyaluronic acid on tyrosyl-tRNA synthetase (Staphylococcus aureus: -6.13 kcal/mol, Escherichia coli: -5.79 kcal/mol) and topoisomerase II DNA gyrase (Staphylococcus aureus: -5.02 kcal/mol, Escherichia coli: -4.90 kcal/mol) confirmed the ligands' possible binding mode to the appropriate targets' sites. We also employed molecular dynamics simulation and showed that HA binds more strongly with 1JIL (-85.455 ± 12.623 kJ/mol) compared to 2YXN (-49.907 ± 64.191 kJ/mol), 5CDP (-47.285 ± 13.925 kJ/mol), and 6RKS (-45.306 ± 21.338 kJ/mol). We also report that the ligand forms several hydrogen bonds in molecular simulation, implying regular interaction with key residues of the enzymes. The results in this study indicate the potential use of HA in the vast field of applications having both asthetic and medicinal values.

摘要

本世纪,抗生素耐药性已成为一个重大的公共卫生问题。此外,氧化应激也可能是选择耐药细菌菌株的一个因素。当前的研究分析了微生物产生的透明质酸的抗菌活性和抗氧化活性。它对金黄色葡萄球菌和大肠杆菌菌株具有显著的抗菌作用,抗氧化试验获得的IC值为487.65µg/mL。我们对透明质酸与酪氨酰 - tRNA合成酶(金黄色葡萄球菌:-6.13千卡/摩尔,大肠杆菌:-5.79千卡/摩尔)和拓扑异构酶II DNA促旋酶(金黄色葡萄球菌:-5.02千卡/摩尔,大肠杆菌:-4.90千卡/摩尔)的分子对接研究证实了配体与相应靶点位点的可能结合模式。我们还进行了分子动力学模拟,结果表明与2YXN(-49.907±64.191千焦/摩尔)、5CDP(-47.285±13.925千焦/摩尔)和6RKS(-45.306±21.338千焦/摩尔)相比,透明质酸与1JIL的结合更强(-85.455±12.623千焦/摩尔)。我们还报告称,在分子模拟中该配体形成了几个氢键,这意味着它与酶的关键残基有规律的相互作用。本研究结果表明透明质酸在具有美学和药用价值的广阔应用领域具有潜在用途。

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Int J Mol Sci. 2021 Dec 14;22(24):13428. doi: 10.3390/ijms222413428.
2
Potential alternatives to current cholinesterase inhibitors: an drug repurposing approach.当前胆碱酯酶抑制剂的潜在替代品:一种药物再利用方法。
Drug Dev Ind Pharm. 2021 Jun;47(6):919-930. doi: 10.1080/03639045.2021.1952216. Epub 2021 Jul 27.
3
Vitamin C and Vitamin D3 show strong binding with the amyloidogenic region of G555F mutant of Fibrinogen A alpha-chain associated with renal amyloidosis: proposed possible therapeutic intervention.
维生素 C 和维生素 D3 与与肾脏淀粉样变性相关的纤维蛋白原 A 链 G555F 突变体的淀粉样形成区域具有很强的结合作用:提出可能的治疗干预措施。
Mol Divers. 2022 Apr;26(2):939-949. doi: 10.1007/s11030-021-10205-7. Epub 2021 Mar 12.
4
A computational prediction of SARS-CoV-2 structural protein inhibitors from (Neem).从(印度楝树)中计算预测 SARS-CoV-2 结构蛋白抑制剂。
J Biomol Struct Dyn. 2021 Jul;39(11):4111-4121. doi: 10.1080/07391102.2020.1774419. Epub 2020 Jun 11.
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Interaction of selected biomolecules and metabolites with amyloidogenic proteins.与淀粉样蛋白形成相关的生物分子和代谢物的相互作用。
J Biomol Struct Dyn. 2021 Jun;39(9):3061-3070. doi: 10.1080/07391102.2020.1760138. Epub 2020 May 12.
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Hyaluronic Acid Reduces Bacterial Fouling and Promotes Fibroblasts' Adhesion onto Chitosan 2D-Wound Dressings.透明质酸减少细菌黏附并促进成纤维细胞黏附到壳聚糖 2D 伤口敷料上。
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Future Antibacterial Strategies: From Basic Concepts to Clinical Challenges.未来抗菌策略:从基础概念到临床挑战。
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