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具有促进硅藻三角褐指藻生长能力的海洋细菌的全基因组序列。

Whole-genome sequences of marine bacteria presenting the ability to promote the growth of the diatom Phaeodactylum tricornutum.

作者信息

Martins Rodrigo, Bertrand Constança D F, Quintas-Nunes Francisco, Reynolds-Brandão Pedro, Barreto Crespo Maria T, Nascimento Francisco X

机构信息

Instituto de Biologia Experimental e Tecnológica (iBET), Apartado 12, 2781-901 Oeiras, Portugal.

Instituto de Tecnologia Química e Biológica António Xavier, Universidade Nova de Lisboa (ITQB NOVA), Av. da República, 2780-157 Oeiras, Portugal.

出版信息

Access Microbiol. 2024 Sep 27;6(9). doi: 10.1099/acmi.0.000864.v3. eCollection 2024.

DOI:10.1099/acmi.0.000864.v3
PMID:39346683
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11432598/
Abstract

We describe the whole-genome sequences of seven diverse marine bacteria isolated from Portuguese environments that presented the ability to promote the growth of the model diatom, . The bacterial genome sequences will contribute to the study of genetic and molecular mechanisms involved in diatom-bacteria interactions.

摘要

我们描述了从葡萄牙环境中分离出的七种不同海洋细菌的全基因组序列，这些细菌具有促进模式硅藻生长的能力。这些细菌的基因组序列将有助于研究硅藻与细菌相互作用中涉及的遗传和分子机制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/52d4/11432598/a2cd794b1cf0/acmi-6-00864-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/52d4/11432598/a2cd794b1cf0/acmi-6-00864-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/52d4/11432598/a2cd794b1cf0/acmi-6-00864-g001.jpg

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本文引用的文献

1
sp. NFXS83 in Marine Biotechnological Applications: From Microalgae Growth Promotion to the Production of Secondary Metabolites.海洋生物技术应用中的新种NFXS83：从促进微藻生长到次级代谢产物的生产
Microorganisms. 2023 Mar 30;11(4):902. doi: 10.3390/microorganisms11040902.
2
Phaeodactylum tricornutum: A Diatom Cell Factory.三角褐指藻：一个硅藻细胞工厂。
Trends Biotechnol. 2020 Jun;38(6):606-622. doi: 10.1016/j.tibtech.2019.12.023. Epub 2020 Jan 21.
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Trimmomatic: a flexible trimmer for Illumina sequence data.Trimmomatic：一款适用于 Illumina 测序数据的灵活修剪工具。
Bioinformatics. 2014 Aug 1;30(15):2114-20. doi: 10.1093/bioinformatics/btu170. Epub 2014 Apr 1.
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Interactions between diatoms and bacteria.硅藻与细菌的相互作用。
Microbiol Mol Biol Rev. 2012 Sep;76(3):667-84. doi: 10.1128/MMBR.00007-12.
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SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.SPAdes：一种新的基因组组装算法及其在单细胞测序中的应用
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