Water Pollution Research Department, Environment and Climate Change Research Institute, National Research Centre, 33 El-Bohouth St., Dokki, Giza, 12622, Egypt.
Center of Excellence for Research and Applied Studies on Climate Change and Sustainable Development, National Research Centre (NRC), 33 El Bohouth St. Dokki, Giza, 12622, Egypt.
Sci Rep. 2024 Oct 1;14(1):22801. doi: 10.1038/s41598-024-72846-6.
Modern laboratory medicine relies on analytical instruments for bacterial detection, focusing on biosensors and optical sensors for early disease diagnosis and treatment. Thus, Density Functional Theory (DFT) was utilized to study the reactivity of glycine interacted with metal oxides (ZnO, MgO, and CaO) for bacterial detection. Total dipole moment (TDM), frontier molecular orbitals (FMOs), FTIR spectroscopic data, electronic transition states, chemical reactivity descriptors, nonlinear optical (NLO) characteristics, and molecular electrostatic potential (MESP) were all investigated at the B3LYP/6-31G(d, p) level using DFT and Time-Dependent DFT (TD-DFT). The Coulomb-attenuating approach (CAM-B3LYP) was utilized to obtain theoretical electronic absorption spectra with the 6-31G(d, p) basis set to be more accurate than alternative quantum chemical calculation approaches, showing good agreement with the experimental data. The TDM and FMO investigation showed that glycine/CaO model has the highest TDM (10.129Debye) and lowest band gap (1.643 eV). The DFT computed IR and the experimental FTIR are consistent. The calculated UV-vis spectra showed a red shift with an increase in polarity following an increase in the absorption wavelength due to the interaction with ZnO, MgO, and CaO. Among the five solvents of water, methanol, ethanol, DMSO and acetone, the water and DMSO enhances the UV-Vis absorption. Glycine/CaO model showed high linear polarizability (14.629 × 10esu) and first hyperpolarizability (23.117 × 10esu), indicating its potential for nonlinear optical applications. The results showed that all model molecules, particularly glycine/CaO, contribute significantly to the development of materials with potential NLO features for sensor and optoelectronic applications. Additionally, MESP confirmed the increased electronegativity of the studied structures. Additionally, glycine/ZnO nanocomposite was synthesized and characterized using IR and UV-visible spectroscopy to determine their structural and spectroscopic features. It was discovered that there was good agreement between the DFT computed findings and the related experimental data. The antibacterial activity of glycine/ZnO nanocomposites against Staphylococcus aureus (S. aureus) and Pseudomonas aeruginosa were studied in terms of concentration and time. The results showed that increasing the concentration of glycine/ZnO nanocomposite significantly enhanced its antibacterial efficacy by lowering optical density. Notably, Pseudomonas aeruginosa exhibited lower susceptibility to the nanocomposite compared to S. aureus, requiring higher concentrations for effective bactericidal action. In summary, this study contributes novel insights into the dual functionality of glycine-metal oxide complexes, with significant implications as optical biosensor for microbial detection.
现代实验室医学依赖于分析仪器进行细菌检测,侧重于生物传感器和光学传感器,以实现早期疾病诊断和治疗。因此,采用密度泛函理论(DFT)研究了甘氨酸与金属氧化物(ZnO、MgO 和 CaO)相互作用的反应性,以用于细菌检测。在 B3LYP/6-31G(d, p)水平下,使用 DFT 和时间相关 DFT(TD-DFT)研究了总偶极矩(TDM)、前沿分子轨道(FMO)、FTIR 光谱数据、电子跃迁态、化学反应性描述符、非线性光学(NLO)特性和分子静电势(MESP)。采用库仑衰减方法(CAM-B3LYP)获得了理论电子吸收光谱,结果表明,使用 6-31G(d, p)基组的理论电子吸收光谱比替代量子化学计算方法更准确,与实验数据吻合较好。TDM 和 FMO 的研究表明,甘氨酸/CaO 模型具有最高的 TDM(10.129Debye)和最低的能带隙(1.643 eV)。DFT 计算的 IR 和实验的 FTIR 是一致的。计算的 UV-vis 光谱显示,随着极性的增加,吸收波长的增加导致红移,这是由于与 ZnO、MgO 和 CaO 的相互作用所致。在水、甲醇、乙醇、DMSO 和丙酮这五种溶剂中,水和 DMSO 增强了 UV-Vis 吸收。甘氨酸/CaO 模型显示出高线性极化率(14.629×10esu)和一阶超极化率(23.117×10esu),表明其在非线性光学应用方面具有潜力。结果表明,所有模型分子,特别是甘氨酸/CaO,为具有潜在 NLO 特性的传感器和光电子应用材料的发展做出了重要贡献。此外,MESP 证实了所研究结构的电负性增加。此外,还通过红外和紫外-可见光谱合成和表征了甘氨酸/ZnO 纳米复合材料,以确定其结构和光谱特征。发现 DFT 计算结果与相关实验数据吻合较好。研究了甘氨酸/ZnO 纳米复合材料对金黄色葡萄球菌(S. aureus)和铜绿假单胞菌的抗菌活性,分别考虑了浓度和时间的影响。结果表明,随着甘氨酸/ZnO 纳米复合材料浓度的增加,其降低光学密度的抗菌效果显著增强。值得注意的是,与 S. aureus 相比,铜绿假单胞菌对纳米复合材料的敏感性较低,需要更高的浓度才能实现有效的杀菌作用。总之,本研究为甘氨酸-金属氧化物配合物的双重功能提供了新的见解,对微生物检测的光学生物传感器具有重要意义。