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(雀形目:燕雀科)的线粒体全基因组及系统发育分析

Complete mitochondrial genome and phylogenetic analysis of (Passeriformes: Fringillidae).

作者信息

Gao Xiaodong, Liu Jincheng, Zhang Xinyue, Zhao Tong

机构信息

College of Life Science, Qufu Normal University, Qufu, PR China.

Department of Student Affairs, Qufu Normal University, Qufu, PR China.

出版信息

Mitochondrial DNA B Resour. 2024 Oct 1;9(10):1327-1330. doi: 10.1080/23802359.2024.2410468. eCollection 2024.

DOI:10.1080/23802359.2024.2410468
PMID:39359379
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11445922/
Abstract

In this study, we employed high-throughput metagenomic data to assemble the mitochondrial genome (mitogenome) of the European greenfinch (; Linnaeus 1758). The circular mitogenome was 16,813 base pairs (bp) in length, containing 13 protein-coding genes (PCGs), 22 tRNA genes, 2 rRNA genes, and 1 control region. The base composition of the mitogenome is 30.6% A, 30.7% C, 14.2% G, and 24.5% T, resulting in a GC content of 44.9%. Phylogenetic analysis, utilizing the concatenation of the 13 mitochondrial PCGs from 32 related species of the order Passeriformes, indicated a closer relationship between and . Moreover, the genus was closely related to the genera of , , , and . This mitogenomic data of not only be helpful for species identification but also facilitates our understanding of the evolutionary relationship among different species in genus , which experienced rapid radiation evolution.

摘要

在本研究中,我们利用高通量宏基因组数据组装了欧洲金翅雀(学名:Carduelis chloris;林奈,1758年)的线粒体基因组(线粒体基因组)。环状线粒体基因组长度为16,813个碱基对(bp),包含13个蛋白质编码基因(PCG)、22个tRNA基因、2个rRNA基因和1个控制区。线粒体基因组的碱基组成为30.6%A、30.7%C、14.2%G和24.5%T,GC含量为44.9%。系统发育分析利用雀形目32个相关物种的13个线粒体PCG的串联,表明欧洲金翅雀与[此处原文缺失相关物种学名]关系更近。此外,[此处原文缺失相关属名]属与[此处原文缺失相关属名]属、[此处原文缺失相关属名]属、[此处原文缺失相关属名]属和[此处原文缺失相关属名]属密切相关。欧洲金翅雀的这种线粒体基因组数据不仅有助于物种鉴定,还促进了我们对[此处原文缺失相关属名]属中经历快速辐射进化的不同物种之间进化关系的理解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1717/11445922/19cca7e54b1f/TMDN_A_2410468_F0003_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1717/11445922/63856a2e0930/TMDN_A_2410468_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1717/11445922/73c6679b88ca/TMDN_A_2410468_F0002_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1717/11445922/19cca7e54b1f/TMDN_A_2410468_F0003_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1717/11445922/63856a2e0930/TMDN_A_2410468_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1717/11445922/73c6679b88ca/TMDN_A_2410468_F0002_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1717/11445922/19cca7e54b1f/TMDN_A_2410468_F0003_C.jpg

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