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……的完整叶绿体基因组序列

The complete chloroplast genome sequence of .

作者信息

Li Huan, Zhang Tianlei, Liang Jiale, Tang Xuan, Chenyang Zhuoyu, Zhu Rong, Chen Ying, Kuang Qishan, Huang Rongjie, Yin Hanbin, Zeng Xingyu, Liu Yongle, Du Zhitian, Huang Kerui, Sun Lei

机构信息

Hunan Provincial Key Laboratory for Molecular Immunity Technology of Aquatic Animal Diseases, College of Life and Environmental Science, Hunan University of Arts and Science, Changde, Hunan, China.

Key Laboratory of Research and Utilization of Ethnomedicinal Plant Resources of Hunan Province, College of Biological and Food Engineering, Huaihua University, Huaihua, China.

出版信息

Mitochondrial DNA B Resour. 2024 Sep 30;9(10):1302-1306. doi: 10.1080/23802359.2024.2410444. eCollection 2024.

DOI:10.1080/23802359.2024.2410444
PMID:39359383
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11445898/
Abstract

has persistently been utilized as a traditional folk herbal medicine. This study has sequenced the chloroplast genome of to establish its genomic characteristics and to discern its phylogenetic relationships with other closely related species. The chloroplast genome structure of reveals a circular molecule with a length of 169,606 bp, including a large single copy (LSC) region of 76,086 bp, a small single copy (SSC) region of 18,314 bp, and a pair of inverted repeats (IRS) region of 37,603 bp. The entire genome contains 138 genes, which consist of 88 protein-coding genes, 42 tRNA genes, and 8 rRNA genes. Phylogenetic analysis suggests that is closely related to , , and , sharing a common ancestor and forming sister lineages. This research provides genetic information for further study on .

摘要

一直被用作传统民间草药。本研究对[物种名称]的叶绿体基因组进行了测序,以确定其基因组特征,并辨别其与其他近缘物种的系统发育关系。[物种名称]的叶绿体基因组结构显示为一个长度为169,606 bp的环状分子,包括一个76,086 bp的大单拷贝(LSC)区域、一个18,314 bp的小单拷贝(SSC)区域和一对37,603 bp的反向重复(IRS)区域。整个基因组包含138个基因,其中包括88个蛋白质编码基因、42个tRNA基因和8个rRNA基因。系统发育分析表明,[物种名称]与[其他物种名称1]、[其他物种名称2]和[其他物种名称3]密切相关,共享一个共同祖先并形成姐妹谱系。本研究为[物种名称]的进一步研究提供了遗传信息。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a125/11445898/1255b459afdf/TMDN_A_2410444_F0003_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a125/11445898/8418817ef577/TMDN_A_2410444_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a125/11445898/d856a03368ba/TMDN_A_2410444_F0002_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a125/11445898/1255b459afdf/TMDN_A_2410444_F0003_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a125/11445898/8418817ef577/TMDN_A_2410444_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a125/11445898/d856a03368ba/TMDN_A_2410444_F0002_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a125/11445898/1255b459afdf/TMDN_A_2410444_F0003_B.jpg

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本文引用的文献

1
Comparative chloroplast genomics reveals the phylogeny and the adaptive evolution of Begonia in China.比较叶绿体基因组学揭示了中国秋海棠的系统发育和适应性进化。
BMC Genomics. 2023 Oct 27;24(1):648. doi: 10.1186/s12864-023-09563-3.
2
The complete chloroplast genome sequence of , an endangered species in China.中国一种濒危物种的完整叶绿体基因组序列。 (原文中“of ”后面缺少具体物种名称)
Mitochondrial DNA B Resour. 2023 Jul 18;8(7):746-750. doi: 10.1080/23802359.2023.2231103. eCollection 2023.
3
, a new species in  sect.  (Begoniaceae) from Guangxi of China, based on morphological and molecular evidence.
基于形态学和分子证据,中国广西秋海棠科(Begoniaceae)某组的一个新物种。
PhytoKeys. 2022 Nov 22;214:27-38. doi: 10.3897/phytokeys.214.90004. eCollection 2022.
4
CPGView: A package for visualizing detailed chloroplast genome structures.CPGView:一个用于可视化详细叶绿体基因组结构的软件包。
Mol Ecol Resour. 2023 Apr;23(3):694-704. doi: 10.1111/1755-0998.13729. Epub 2023 Jan 1.
5
Characterization of the complete chloroplast genome of ..的完整叶绿体基因组特征分析
Mitochondrial DNA B Resour. 2022 Dec 12;7(12):2031-2034. doi: 10.1080/23802359.2022.2119107. eCollection 2022.
6
The complete chloroplast genome sequence of (Begoniaceae).秋海棠科(秋海棠属)的完整叶绿体基因组序列
Mitochondrial DNA B Resour. 2022 Jun 23;7(6):1106-1108. doi: 10.1080/23802359.2022.2087548. eCollection 2022.
7
A Comparative Analysis of the Chloroplast Genomes of Four Medicinal Plants.四种药用植物叶绿体基因组的比较分析
Front Genet. 2022 Apr 25;13:764534. doi: 10.3389/fgene.2022.764534. eCollection 2022.
8
The complete chloroplast genome sequence of (Begoniaceae).(秋海棠科)的完整叶绿体基因组序列。
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