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本文引用的文献

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ISME J. 2024 Jan 8;18(1). doi: 10.1093/ismejo/wrad015.
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Climate change and the aquatic continuum: A cyanobacterial comeback story.气候变化与水生连续统：蓝藻卷土重来的故事。
Environ Microbiol Rep. 2023 Feb;15(1):3-12. doi: 10.1111/1758-2229.13122. Epub 2022 Sep 12.
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Metatranscriptomic Sequencing of Winter and Spring Planktonic Communities from Lake Erie, a Laurentian Great Lake.对五大湖之一的伊利湖冬春浮游生物群落进行宏转录组测序。
Microbiol Resour Announc. 2022 Jul 21;11(7):e0035122. doi: 10.1128/mra.00351-22. Epub 2022 Jun 2.
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Future HAB science: Directions and challenges in a changing climate.未来的赤潮科学：气候变化下的方向与挑战。
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Long-term development of hypolimnetic oxygen depletion rates in the large Lake Constance.康斯坦茨大湖湖下层氧消耗率的长期发展情况。
Ambio. 2017 Sep;46(5):554-565. doi: 10.1007/s13280-017-0896-8. Epub 2017 Jan 30.
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MEGAHIT: an ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph.MEGAHIT：通过简洁的 de Bruijn 图实现的超快速单节点解决方案，适用于大型和复杂的宏基因组组装。
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昼夜元转录组揭示了以蓝藻为主的伊利湖群落对偶发事件的响应。

Diel metatranscriptomes capture cyanobacteria-dominated Lake Erie community response to episodic events.

作者信息

Zepernick Brittany N, Boegehold Anna G, Kiledal E Anders, Chase Emily E, Hart Lauren N, Houghton Katelyn A, Martin Robbie M, Williams Paige A, Johnson Emma C, Schofield Paris K, Cory Rose M, Chaganti Subba Rao, Godwin Casey M, Spanbauer Trisha L, Dick Gregory J, Errera Reagan M, Wilhelm Steven W

机构信息

Department of Microbiology, University of Tennessee Knoxville, Knoxville, Tennessee, USA.

Cooperative Institute for Great Lakes Research (CIGLR), University of Michigan, Ann Arbor, Michigan, USA.

出版信息

Microbiol Resour Announc. 2024 Nov 12;13(11):e0065924. doi: 10.1128/mra.00659-24. Epub 2024 Oct 4.

DOI:10.1128/mra.00659-24
PMID:39365054
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11555988/
Abstract

Here, we report on the raw and coassembled metatranscriptomes of 39 Lake Erie surface (1.0 m) water samples collected over a 2-day diel period encompassing episodic weather and bloom events. Preliminary taxonomic annotations and read mappings revealed that spp. accounted for up to ~47% of the transcriptionally active community.

摘要

在此，我们报告了在为期2天的昼夜周期内采集的39个伊利湖表层（1.0米）水样的原始和共组装宏转录组，该周期涵盖了偶发天气和水华事件。初步的分类注释和读数比对显示， spp. 占转录活性群落的比例高达约47%。