School of Life Sciences, University of Nottingham, University Park, Nottingham, NG7 2RD, UK.
Phenotypeca, BioCity Nottingham, Nottingham, NG1 1GF, UK.
Microb Cell Fact. 2024 Oct 7;23(1):267. doi: 10.1186/s12934-024-02536-5.
Gene expression noise (variation in gene expression among individual cells of a genetically uniform cell population) can result in heterogenous metabolite production by industrial microorganisms, with cultures containing both low- and high-producing cells. The presence of low-producing individuals may be a factor limiting the potential for high yields. This study tested the hypothesis that low-producing variants in yeast cell populations can be continuously counter-selected, to increase net production of glutathione (GSH) as an exemplar product.
A counter-selection system was engineered in Saccharomyces cerevisiae based on the known feedback inhibition of gamma-glutamylcysteine synthetase (GSH1) gene expression, which is rate limiting for GSH synthesis: the GSH1 ORF and the counter-selectable marker GAP1 were expressed under control of the TEF1 and GSH-regulated GSH1 promoters, respectively. An 18% increase in the mean cellular GSH level was achieved in cultures of the engineered strain supplemented with D-histidine to counter-select cells with high GAP1 expression (i.e. low GSH-producing cells). The phenotype was non-heritable and did not arise from a generic response to D-histidine, unlike that with certain other test-constructs prepared with alternative markers.
The results corroborate that the system developed here improves GSH production by targeting low-producing cells. This supports the potential for exploiting end-product/promoter interactions to enrich high-producing cells in phenotypically heterogeneous populations, in order to improve metabolite production by yeast.
基因表达噪声(遗传上一致的细胞群体中个体细胞之间的基因表达变化)可能导致工业微生物产生不均匀的代谢产物,其中包含低产细胞和高产细胞。低产个体的存在可能是限制高产量潜力的一个因素。本研究检验了这样一个假设,即在酵母细胞群体中,低产变体可以通过连续的反向选择来增加谷胱甘肽(GSH)的净产量,GSH 是一个典型的产物。
在酿酒酵母中设计了一个反向选择系统,该系统基于众所周知的γ-谷氨酰半胱氨酸合成酶(GSH1)基因表达的反馈抑制,这是 GSH 合成的限速步骤:GSH1 ORF 和可反向选择的标记 GAP1 分别在 TEF1 和 GSH 调控的 GSH1 启动子的控制下表达。在补充 D-组氨酸的工程菌株的培养物中,细胞内 GSH 水平平均提高了 18%,以反向选择具有高 GAP1 表达(即低 GSH 产生细胞)的细胞。该表型是不可遗传的,也不是由对 D-组氨酸的一般反应引起的,与使用其他标记物制备的某些其他测试构建体不同。
结果证实,这里开发的系统通过靶向低产细胞来提高 GSH 的产量。这支持了利用终产物/启动子相互作用在表型异质群体中富集高产细胞的潜力,从而提高酵母的代谢产物产量。