Singapore Eye Research Institute, Singapore National Eye Centre, Duke-NUS Medical School, 20 College Rd, Singapore, 169856, Singapore.
Department of Ophthalmology, Yong Loo Lin School of Medicine, National University of Singapore, Singapore, Singapore.
Sci Rep. 2024 Oct 8;14(1):23486. doi: 10.1038/s41598-024-67337-7.
The mechanisms underlying myopia pathogenesis are not well understood. Using publicly-available human and animal datasets, we expound on the roles of known, implicated proteins, and new myopia-related signaling pathways were hypothesized. Proteins identified from human serum or ocular fluids, and from ocular tissues in myopic animal models, were uploaded and analyzed with the QIAGEN Ingenuity Pathway Analysis (IPA) software (March 2023). With each IPA database update, more potentially-relevant proteins and signaling pathways previously unavailable during data acquisition are added, allowing extraction of novel conclusions from existing data. Canonical pathway analysis was used to analyze these data and calculate an IPA activation z-score-which indicates not only whether an association is significant, but also whether the pathway is likely activated or inhibited. Cellular immune response and cytokine signaling were frequently found to be affected in both human and animal myopia studies. Analysis of two publicly-available proteomic datasets highlighted a potential role of the innate immune system and inflammation in myopia development, detailing specific signaling pathways involved such as Granzyme A (GzmA) and S100 family signaling in the retina, and activation of myofibroblast trans-differentiation in the sclera. This perspective in myopia research may facilitate development of more effective and targeted therapeutic agents.
近视发病机制的相关机制尚未完全阐明。我们使用公开的人类和动物数据集,阐述了已知的、涉及的蛋白质的作用,并假设了新的与近视相关的信号通路。从近视动物模型的人血清或眼液以及眼组织中鉴定出的蛋白质被上传并使用 QIAGEN Ingenuity Pathway Analysis(IPA)软件进行分析(2023 年 3 月)。随着每个 IPA 数据库的更新,更多以前在数据采集过程中无法获得的潜在相关蛋白质和信号通路被添加进来,从而可以从现有数据中提取新的结论。使用经典途径分析对这些数据进行分析,并计算 IPA 激活 z 分数-不仅表明关联是否显著,还表明途径是否可能被激活或抑制。在人类和动物近视研究中,经常发现细胞免疫反应和细胞因子信号受到影响。对两个公开的蛋白质组数据集的分析突出了固有免疫系统和炎症在近视发展中的潜在作用,详细描述了涉及的特定信号通路,如视网膜中的 Granzyme A(GzmA)和 S100 家族信号,以及巩膜中肌成纤维细胞的转分化激活。这种近视研究的观点可能有助于开发更有效和有针对性的治疗药物。