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来自中国云南的1840年哈氏月见草(柳叶菜科)的完整叶绿体基因组。

The complete chloroplast genome of J. Harrison, 1840 (Onagraceae) from Yunnan, China.

作者信息

Li Siying, Wang Shuang, Fan Min

机构信息

College of Pharmacy, Dali University, Dali, China.

出版信息

Mitochondrial DNA B Resour. 2024 Oct 6;9(10):1370-1373. doi: 10.1080/23802359.2024.2412229. eCollection 2024.

DOI:10.1080/23802359.2024.2412229
PMID:39381365
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11459746/
Abstract

J. Harrison, 1840, a perennial shrub, is renowned for its vividly colored and uniquely shaped blooms, which have an extended flowering season. Commonly cultivated as an ornamental potted plant, it is utilized in traditional Chinese medicine. In this study, we successfully sequenced and assembled the complete chloroplast genome of using high-throughput Illumina sequencing technology. The assembled chloroplast genome displays a typical quadripartite structure, with a total length of 156,391 bp. It consists of a pair of inverted repeat regions (IRs), each measuring 25,069 bp, separated by a large single-copy region (LSC) of 87,754 bp and a small single-copy region (SSC) of 18,499 bp. The overall GC content of the genome is 37.60%. The genome includes a total of 129 genes, comprising 84 protein-coding genes, 37 tRNA genes, and eight rRNA genes. Phylogenetic analysis of 17 complete chloroplast genomes revealed that forms a monophyletic group with the entire . This study provides a molecular foundation for future phylogenetic research on .

摘要

J. Harrison,1840年,一种多年生灌木,以其色彩鲜艳、形状独特的花朵而闻名,花期较长。它通常作为观赏盆栽植物种植,也被用于传统中药。在本研究中,我们使用高通量Illumina测序技术成功地对其完整叶绿体基因组进行了测序和组装。组装后的叶绿体基因组呈现典型的四分体结构,全长156,391 bp。它由一对反向重复区域(IRs)组成,每个区域长25,069 bp,被一个87,754 bp的大单拷贝区域(LSC)和一个18,499 bp的小单拷贝区域(SSC)隔开。基因组的总体GC含量为37.60%。该基因组总共包含129个基因,包括84个蛋白质编码基因、37个tRNA基因和8个rRNA基因。对17个完整叶绿体基因组的系统发育分析表明,它与整个[相关物种名称]形成一个单系类群。本研究为未来对[相关物种名称]的系统发育研究提供了分子基础。 (注:原文中部分内容缺失物种名称,翻译时用[相关物种名称]表示)

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f7f9/11459746/7b0943f44105/TMDN_A_2412229_F0003_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f7f9/11459746/48e7cce374fe/TMDN_A_2412229_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f7f9/11459746/b8506833b8b8/TMDN_A_2412229_F0002_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f7f9/11459746/7b0943f44105/TMDN_A_2412229_F0003_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f7f9/11459746/48e7cce374fe/TMDN_A_2412229_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f7f9/11459746/b8506833b8b8/TMDN_A_2412229_F0002_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f7f9/11459746/7b0943f44105/TMDN_A_2412229_F0003_C.jpg

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