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转移性结直肠癌患者血浆外泌体的蛋白质组学分析

Proteomic analysis of plasma exosomes in patients with metastatic colorectal cancer.

作者信息

Zhong Zhaoyue, Ji Jiayin, Li Hongxia, Kang Ling, Zhu Haipeng

机构信息

School of Public Health, Xinjiang Medical University, No. 567, Shangde North Road, Shuimogou District, Urumqi, 830017, Xinjiang, China.

Karamay Central Hospital, Number 67, Junggar Road, Karamay Region, Karamay, 834000, Xinjiang, China.

出版信息

Clin Proteomics. 2024 Oct 9;21(1):58. doi: 10.1186/s12014-024-09510-8.

Abstract

BACKGROUND

The diagnosis and treatment of colorectal cancer (CRC), especially metastatic colorectal cancer (mCRC), is a major priority and research challenge. We screened for expression differences in the plasma exosomal proteomes of patients with mCRC, those with CRC, and healthy controls (HCs) to discover potential biomarkers for mCRC.

METHODS

Plasma samples from five patients with mCRC, five patients with CRC, and five HCs were collected and processed to isolate exosomes by ultracentrifugation. Exosomal protein concentrations were determined using the BCA kit, and liquid chromatography-mass spectrometry was utilized to identify and analyze the proteins.

RESULTS

From the exosomes isolated from plasma samples, a total of 994 quantifiable proteins were detected, including 287 differentially expressed proteins identified by quantitative proteomics analyses. Totals of 965, 963 and 968 proteins were identified in mCRC patients, CRC patients, and HCs, respectively. The study identified 83 proteins with differential expression in the plasma exosomes of mCRC patients. The top 10 upregulated proteins in the mCRC group and CRC groups were ITGA4, GNAI1, SFTPA2, UGGT1, GRN, LBP, SMIM1, BMP1, HMGN5, and MFAP4, while the top 10 downregulated proteins were PSMB8, LCK, RAB35, PSMB4, CD81, CD63, GLIPR2, RAP1B, RAB30, and CES1. Western Blot validation data confirmed that ITGA4 and GNAI1 were unequivocally enriched in plasma-derived exosomes from mCRC patients.

CONCLUSIONS

These differential proteins offer potential new candidate molecules for further research on the pathogenesis of mCRC and the identification of therapeutic targets. This study sheds light on the potential significance of plasma exosome proteomics studies in our understanding and treatment of mCRC.

摘要

背景

结直肠癌(CRC),尤其是转移性结直肠癌(mCRC)的诊断和治疗是主要重点及研究挑战。我们筛查了mCRC患者、CRC患者及健康对照(HCs)血浆外泌体蛋白质组中的表达差异,以发现mCRC的潜在生物标志物。

方法

收集5例mCRC患者、5例CRC患者和5例HCs的血浆样本,通过超速离心处理以分离外泌体。使用BCA试剂盒测定外泌体蛋白浓度,并利用液相色谱 - 质谱法鉴定和分析蛋白质。

结果

从血浆样本中分离出的外泌体共检测到994种可定量蛋白质,其中通过定量蛋白质组学分析鉴定出287种差异表达蛋白质。mCRC患者、CRC患者和HCs中分别鉴定出965、963和968种蛋白质。该研究鉴定出83种在mCRC患者血浆外泌体中差异表达的蛋白质。mCRC组和CRC组中上调的前10种蛋白质为ITGA4、GNAI1、SFTPA2、UGGT1、GRN、LBP、SMIM1、BMP1、HMGN5和MFAP4,而下调的前10种蛋白质为PSMB8、LCK、RAB35、PSMB4、CD81、CD63、GLIPR2、RAP1B、RAB30和CES1。蛋白质印迹验证数据证实ITGA4和GNAI1在mCRC患者血浆来源的外泌体中明显富集。

结论

这些差异蛋白质为进一步研究mCRC的发病机制和鉴定治疗靶点提供了潜在的新候选分子。本研究揭示了血浆外泌体蛋白质组学研究在我们对mCRC的理解和治疗中的潜在意义。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/238a/11465920/cdeca81eddbe/12014_2024_9510_Fig1_HTML.jpg

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