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sp. nov.,一种从白洋淀湖滨土壤样本中分离出的产番茄红素放线菌。

sp. nov., a lycopene-producing actinomycetes isolated from lakeside soil sample of Baiyangdian.

机构信息

College of Life Sciences, Hebei University, Baoding 071002, Hebei Province, PR China.

Key Laboratory of Microbial Diversity Research and Application of Hebei Province, Baoding 071002, Hebei Province, PR China.

出版信息

Int J Syst Evol Microbiol. 2024 Oct;74(10). doi: 10.1099/ijsem.0.006543.

Abstract

A novel actinomycetes producing lycopene, designated HBU208002, was isolated from a lakeside soil sample collected in Baiyangdian, located in Xiong'an New Area of China, and its taxonomic position was investigated by a polyphasic approach. Phylogenetic analysis based on 16S rRNA gene sequence comparisons revealed that the strain HBU208002 fell within the genus and was closely related to JCM 14904 (99.73% identity). However, the average nucleotide identity (ANI), digital DNA-DNA hybridization (dDDH) and average amino acid identity (AAI) values between the strain HBU208002 and JCM 14904 were 91.78, 44.7 and 91.6%, respectively, which were lower than the ANI (95-96%), DDH (>70%) and AAI (>95%) thresholds of prokaryotic microbial defined species. The predominant fatty acids of the strain HBU208002 were iso-C, C ω8c. The menaquinones of the strain HBU208002 were MK-8(H) and MK9(H), while those of JCM 14904 were MK-10(H), MK-10(H), MK-9(H) and MK-9(H). Meanwhile, some phenotypic characterizations and antibacterial activities distinguished the strain HBU208002 from JCM 14904. The strain HBU208002 exhibited inhibitory effects on , and , but JCM 14904 had no activity. Therefore, the strain HBU208002 should be assigned as representing a novel species of the genus , for which the name was proposed. The type strain is HBU208002 (=KCTC49833 = GDMCC4.236).

摘要

一株产番茄红素的放线菌 HBU208002 是从中国雄安新区白洋淀湖边土壤中分离得到的,采用多相分类法对其分类地位进行了研究。基于 16S rRNA 基因序列比较的系统发育分析表明,该菌株 HBU208002 属于 属,与 JCM 14904 (99.73%同源性)最为密切。然而,菌株 HBU208002 与 JCM 14904 之间的平均核苷酸同一性(ANI)、数字 DNA-DNA 杂交(dDDH)和平均氨基酸同一性(AAI)值分别为 91.78%、44.7%和 91.6%,低于原核微生物定义种的 ANI(95-96%)、dDDH(>70%)和 AAI(>95%)的阈值。菌株 HBU208002 的主要脂肪酸为 iso-C 和 C ω8c。菌株 HBU208002 的menaquinones 为 MK-8(H)和 MK9(H),而 JCM 14904 的menaquinones 为 MK-10(H)、MK-10(H)、MK-9(H)和 MK-9(H)。同时,一些表型特征和抗菌活性将菌株 HBU208002 与 JCM 14904 区分开来。菌株 HBU208002 对 、 和 表现出抑制作用,但 JCM 14904 没有活性。因此,菌株 HBU208002 应被鉴定为代表 属的一个新种,命名为 。其模式菌株为 HBU208002(=KCTC49833=GDMCC4.236)。

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