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具有均匀和非均匀刚度的活性细丝的集体行为。

Collective behavior of active filaments with homogeneous and heterogeneous stiffness.

作者信息

Zhao Chaonan, Yan Ran, Zhao Nanrong

机构信息

College of Chemistry, Sichuan University, Chengdu 610064, China.

出版信息

J Chem Phys. 2024 Oct 21;161(15). doi: 10.1063/5.0225429.

Abstract

The collective dynamics of active biopolymers is crucial for many processes in life, such as cellular motility, intracellular transport, and division. Recent experiments revealed fascinating self-organized patterns of diverse active filaments, while an explicit parameter control strategy remains an open problem. Moreover, theoretical studies so far mostly dealt with active chains with uniform stiffness, which are inadequate in describing the more complicated class of polymers with varying stiffness along the backbone. Here, using Langevin dynamics simulations, we investigate the collective behavior of active chains with homogeneous and heterogeneous stiffness in a comparative manner. We map a detailed non-equilibrium phase diagram in activity and stiffness parameter space. A wide range of phase states, including melt, cluster, spiral, polar, and vortex, are demonstrated. The appropriate parameter combination for large-scale polar and vortex formation is identified. In addition, we find that stiffness heterogeneity can substantially modulate the phase behaviors of the system. It has an evident destructive effect on the long-ranged polar structure but benefits the stability of the vortex pattern. Intriguingly, we unravel a novel polar-vortex transition in both homogeneous and heterogeneous systems, which is closely related to the local alignment mechanism. Overall, we achieve new insights into how the interplay among activity, stiffness, and heterogeneity affects the collective dynamics of active filament systems.

摘要

活性生物聚合物的集体动力学对于生命中的许多过程至关重要,例如细胞运动、细胞内运输和分裂。最近的实验揭示了各种活性细丝迷人的自组织模式,而明确的参数控制策略仍然是一个未解决的问题。此外,迄今为止的理论研究大多涉及具有均匀刚度的活性链,这不足以描述沿主链具有不同刚度的更复杂的聚合物类别。在这里,我们使用朗之万动力学模拟,以比较的方式研究具有均匀和非均匀刚度的活性链的集体行为。我们绘制了活性和刚度参数空间中的详细非平衡相图。展示了包括熔体、簇、螺旋、极性和涡旋在内的广泛相态。确定了大规模极性和涡旋形成的合适参数组合。此外,我们发现刚度非均匀性可以显著调节系统的相行为。它对长程极性结构有明显的破坏作用,但有利于涡旋模式的稳定性。有趣的是,我们揭示了均匀和非均匀系统中一种新的极性 - 涡旋转变,这与局部排列机制密切相关。总体而言,我们对活性、刚度和非均匀性之间的相互作用如何影响活性细丝系统的集体动力学有了新的认识。

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