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分析急性心肌梗死中免疫相关基因和免疫细胞亚型的差异。

Analysis of the differences in immune-related genes and immune cell subtypes in acute myocardial infarction.

机构信息

School of Radiology, Shandong First Medical University & Shandong Academy of Medical Sciences, Tai'an, Shandong Province, China.

Department of Cardiology, The Second Affiliated Hospital of Shandong First Medical University, Tai'an, Shandong Province, China.

出版信息

Braz J Med Biol Res. 2024 Oct 14;57:e14345. doi: 10.1590/1414-431X2024e14345. eCollection 2024.

DOI:10.1590/1414-431X2024e14345
PMID:39417451
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11484353/
Abstract

Acute myocardial infarction (AMI) continues to be a leading cause of death globally, with distinct immune cell dynamics in ST-segment elevation myocardial infarction (STEMI) and non-ST-segment elevation myocardial infarction (NSTEMI) playing a critical role in disease progression and patient outcomes. Sample data for STEMI and NSTEMI were downloaded from the Sequence Read Archive (SRA) database (https://www.ncbi.nlm.nih.gov/sra). Differences and correlations of immune infiltrating cells were assessed by CIBERSORT. Differentially expressed genes (DEGs) were identified between STEMI and NSTEMI, followed by functional analysis. Immune-related DEGs were further identified. Some immune-related DEGs were selected to perform expression verification using real-time PCR. There was a significant difference in immune cells between STEMI and NSTEMI, including activated dendritic cells, memory CD4 T cells, mast cells, and CD8 T cells. A total of 229 DEGs were identified, with functions related to inflammatory regulation and drug metabolism. A total of 21 immune-related DEGs, which may play important roles in STEMI and NSTEMI, were identified. Among the 21 immune-related DEGs, genes like CCL18, NRP2, CXCR2, CXCL9, KIR2DL4, BPIFB1, and IL33 were significantly correlated with immune cells and had a tendency for differential expression between STEMI and NSTEMI patients. Our study reveals differences in the distribution of immune cell subsets between STEMI and NSTEMI, highlighting key immune-related genes and their association with immune cells, which may provide new insights into the treatment of AMI.

摘要

急性心肌梗死(AMI)仍然是全球主要的死亡原因,ST 段抬高型心肌梗死(STEMI)和非 ST 段抬高型心肌梗死(NSTEMI)中独特的免疫细胞动力学在疾病进展和患者预后中起着关键作用。STEMI 和 NSTEMI 的样本数据从序列读取档案(SRA)数据库(https://www.ncbi.nlm.nih.gov/sra)下载。通过 CIBERSORT 评估免疫浸润细胞的差异和相关性。鉴定了 STEMI 和 NSTEMI 之间差异表达基因(DEGs),随后进行功能分析。进一步鉴定免疫相关 DEGs。选择一些免疫相关 DEGs 使用实时 PCR 进行表达验证。STEMI 和 NSTEMI 之间的免疫细胞存在显著差异,包括激活的树突状细胞、记忆 CD4 T 细胞、肥大细胞和 CD8 T 细胞。共鉴定出 229 个 DEGs,其功能与炎症调节和药物代谢有关。共鉴定出 21 个免疫相关 DEGs,它们可能在 STEMI 和 NSTEMI 中发挥重要作用。在 21 个免疫相关 DEGs 中,CCL18、NRP2、CXCR2、CXCL9、KIR2DL4、BPIFB1 和 IL33 等基因与免疫细胞显著相关,并且在 STEMI 和 NSTEMI 患者之间存在差异表达的趋势。我们的研究揭示了 STEMI 和 NSTEMI 之间免疫细胞亚群分布的差异,突出了关键的免疫相关基因及其与免疫细胞的关联,这可能为 AMI 的治疗提供新的思路。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0217/11484353/072ff4378cc8/1414-431X-bjmbr-57-e14345-gf005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0217/11484353/5a796c81fa23/1414-431X-bjmbr-57-e14345-gf001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0217/11484353/bd5d96515c57/1414-431X-bjmbr-57-e14345-gf002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0217/11484353/a28b39c73bbc/1414-431X-bjmbr-57-e14345-gf003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0217/11484353/1887e4e32b9b/1414-431X-bjmbr-57-e14345-gf004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0217/11484353/072ff4378cc8/1414-431X-bjmbr-57-e14345-gf005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0217/11484353/5a796c81fa23/1414-431X-bjmbr-57-e14345-gf001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0217/11484353/bd5d96515c57/1414-431X-bjmbr-57-e14345-gf002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0217/11484353/a28b39c73bbc/1414-431X-bjmbr-57-e14345-gf003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0217/11484353/1887e4e32b9b/1414-431X-bjmbr-57-e14345-gf004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0217/11484353/072ff4378cc8/1414-431X-bjmbr-57-e14345-gf005.jpg

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本文引用的文献

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Integrated Multichip Analysis and WGCNA Identify Potential Diagnostic Markers in the Pathogenesis of ST-Elevation Myocardial Infarction.集成多芯片分析和 WGCNA 鉴定 ST 段抬高型心肌梗死发病机制中的潜在诊断标志物。
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Identification of Biomarkers Related to Immune Cell Infiltration with Gene Coexpression Network in Myocardial Infarction.鉴定心肌梗死中与免疫细胞浸润相关的基因共表达网络生物标志物。
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Difference of immune cell infiltration between stable and unstable carotid artery atherosclerosis.
稳定型与不稳定型颈动脉粥样硬化患者免疫细胞浸润的差异。
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