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带有多环异戊二烯部分的核糖体肽。

Ribosomal peptides with polycyclic isoprenoid moieties.

作者信息

Hubrich Florian, Kandy Sanath K, Chepkirui Clara, Padhi Chandrashekhar, Mordhorst Silja, Moosmann Philipp, Zhu Tao, Gugger Muriel, Chekan Jonathan R, Piel Jörn

机构信息

Institute of Microbiology, Eidgenössische Technische Hochschule (ETH) Zürich, Vladimir-Prelog Weg 4, 8093 Zürich, Switzerland.

Present address: Pharmaceutical Institute, Saarland University; Helmholtz Institute for Pharmaceutical Research Saarland (HIPS); Campus Saarbrücken C2.3, 66123 Saarbrücken, Germany.

出版信息

Chem. 2024 Oct 10;10(10):3224-3242. doi: 10.1016/j.chempr.2024.07.026. Epub 2024 Sep 6.

Abstract

Isoprenoid modifications of proteins and peptides serve fundamental biological functions and are of therapeutic interest. While C (farnesyl) and C (geranylgeranyl) moieties are prevalent among proteins, known ribosomal peptide prenylations involve shorter-chain units not exceeding farnesyl in size. To our knowledge, cyclized terpene moieties have not been reported from either biomolecule class. Here we used targeted genome mining and heterologous pathway reconstitution to identify ribosomally synthesized and post-translationally modified peptides (RiPPs) with elaborate, cyclized geranylgeranyl modifications. The installing maturases commonly feature fused prenyltransferase-terpene cyclase architectures. We characterized two bifunctional maturases with distinct prenyltransferase folds and identified the terminal product of a cyanobacterial proteusin as an exceptionally complex pseudosteroid-annelated polycyclic peptide. Bioassays suggest modest anti-cyanobacterial activity with the modification being crucial for activity. Genome data predict cyclic isoprenoid units for various RiPP families including proteusin, Nif11, and lasso peptides and thus broader natural and biotechnological compatibility of the maturase system.

摘要

蛋白质和肽类的类异戊二烯修饰具有重要的生物学功能,并且具有治疗意义。虽然C(法尼基)和C(香叶基香叶基)部分在蛋白质中普遍存在,但已知的核糖体肽类异戊二烯化涉及大小不超过法尼基的较短链单元。据我们所知,这两类生物分子中均未报道过环化萜烯部分。在此,我们利用靶向基因组挖掘和异源途径重建,来鉴定具有精细环化香叶基香叶基修饰的核糖体合成及翻译后修饰肽(RiPPs)。安装成熟酶通常具有融合的异戊二烯基转移酶-萜烯环化酶结构。我们表征了两种具有不同异戊二烯基转移酶折叠的双功能成熟酶,并鉴定出一种蓝藻变形杆菌素的终产物是一种异常复杂的假甾体环化多环肽。生物测定表明其具有适度的抗蓝藻活性,且该修饰对活性至关重要。基因组数据预测了包括变形杆菌素、Nif11和套索肽在内的各种RiPP家族的环状类异戊二烯单元,因此成熟酶系统具有更广泛的天然和生物技术兼容性。

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