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一种研究噻氟酰胺与血红蛋白相互作用的多方面方法。

A multifaceted approach to investigate interactions of thifluzamide with haemoglobin.

作者信息

Yadav Sandeep, Sewariya Shubham, Raman Anirudh Pratap Singh, Singh Prashant, Chandra Ramesh, Jain Pallavi, Singh Anju, Kumari Kamlesh

机构信息

Department of Chemistry, Atma Ram Sanatan Dharma College, University of Delhi, New Delhi, India; Department of Chemistry, SRM Institute of Science & Technology, Delhi-NCR Campus, Modinagar, Ghaziabad, India.

Department of Chemistry, University of Delhi, Delhi, India; School of Pharmacy and Biomedical Sciences, University of Central Lancashire, Preston, UK.

出版信息

Int J Biol Macromol. 2024 Dec;282(Pt 2):136736. doi: 10.1016/j.ijbiomac.2024.136736. Epub 2024 Oct 19.

Abstract

This study explores the interaction between the pesticide thifluzamide (TF) and haemoglobin (Hb) to understand potential structural changes that might affect Hb's function. Using a combination of UV-Visible and fluorescence spectroscopy, circular dichroism (CD), molecular docking, molecular dynamics (MD) simulations, and electrochemical methods, we investigated these interactions in detail. Spectroscopy results indicated the formation of a stable TF-Hb complex, with a binding constant of 6.64 × 10 M at 298 K and a 1:1 binding ratio. The stability of this complex was confirmed by a free energy change (∆G) of -34.491 kJ mol. CD spectroscopy was employed to confirm structural changes in Hb due to thifluzamide binding. Molecular docking studies revealed that TF interacts with specific amino acids in Hb like ALA, HIS, VAL, LYS, and LEU, with a binding energy of -25.10 kJ mol. MD simulations supported these findings by showing conformational changes in Hb upon TF binding, as indicated by RMSD and RMSF analyses. Electrochemical experiments further confirmed the interaction, evidenced by a consistent decrease in the TF's peak in the presence of Hb. Overall, our findings shed light to understand the binding of TF with Hb, causing structural changes that could potentially impact its normal function. This research enhances our understanding of the biochemical effects of TF on Hb, which could have significant implications for biological systems.

摘要

本研究探讨了农药噻氟酰胺(TF)与血红蛋白(Hb)之间的相互作用,以了解可能影响Hb功能的潜在结构变化。我们结合紫外可见光谱和荧光光谱、圆二色光谱(CD)、分子对接、分子动力学(MD)模拟以及电化学方法,对这些相互作用进行了详细研究。光谱结果表明形成了稳定的TF-Hb复合物,在298K时结合常数为6.64×10 M,结合比为1:1。该复合物的稳定性通过-34.491 kJ mol的自由能变化(∆G)得到证实。利用CD光谱证实了由于噻氟酰胺结合导致的Hb结构变化。分子对接研究表明,TF与Hb中的特定氨基酸如ALA、HIS、VAL、LYS和LEU相互作用,结合能为-25.10 kJ mol。MD模拟通过RMSD和RMSF分析表明TF结合后Hb的构象变化,支持了这些发现。电化学实验进一步证实了这种相互作用,在Hb存在的情况下,TF的峰持续下降证明了这一点。总体而言,我们的研究结果有助于理解TF与Hb的结合,这种结合会导致结构变化,可能潜在地影响其正常功能。这项研究增进了我们对TF对Hb生化作用的理解,这可能对生物系统具有重要意义。

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