Javaid Sumaira, Zadi Seema, Awais Muhammad, Wahab Atia-Tul, Zafar Humaira, Maslennikov Innokentiy, Choudhary M Iqbal
Dr. Panjwani Center for Molecular Medicine and Drug Research, International Center of Chemical and Biological Sciences, University of Karachi Karachi 75270 Pakistan
School of Pharmacy, Chapman University Irvine CA 92866 USA.
RSC Adv. 2024 Oct 21;14(45):33080-33093. doi: 10.1039/d4ra06813k. eCollection 2024 Oct 17.
Ubiquitin-specific protease-7 (USP7) is an important drug target as it regulates multiple proteins and genes (such as MDM2 and p53) with roles in cancer progression. Its inhibition can hinder the function of oncogenes, increase tumor suppression, and enhance immune response. The current study was designed to express USP7 in a prokaryotic system, followed by screening of small molecules against it using biophysical methods, primarily STD-NMR technique. Among them, 12 compounds showed interaction with USP7 as inferred from NMR-based screening. These compounds further caused destabilization of USP7 by reducing its melting temperature ( ) up to 6 °C in thermal shift assay. Molecular docking and simulation studies revealed that these compounds bind to the putative substrate binding pocket of USP7 and thus may block the entry of the substrate. Four compounds , 4-hydroxy-diphenyl amine (2), phenyl-(2,3,4-trihydroxyphenyl) methanone (3), 4'-amino-2',5'-diethoxy benzanilide (5), and hydroquinone (12), showed anti-cancer activity against colorectal cancerous cells (HCT116) with IC values in the range of 31-143 μM. These compounds also down-regulated the mRNA expression of the MDM2 gene and up-regulated the mRNA expression of the p53 gene in HCT116 cells, as studied using qPCR analysis. This study thereby identifies several negative modulators of USP7 that can be studied further as potential anti-cancer agents.
泛素特异性蛋白酶7(USP7)是一个重要的药物靶点,因为它调控多种在癌症进展中起作用的蛋白质和基因(如MDM2和p53)。对其进行抑制可阻碍癌基因功能、增强肿瘤抑制作用并增强免疫反应。本研究旨在原核系统中表达USP7,随后使用生物物理方法(主要是STD-NMR技术)筛选针对它的小分子。其中,基于核磁共振的筛选推断有12种化合物与USP7有相互作用。在热位移分析中,这些化合物通过将USP7的解链温度()降低多达6°C,进一步导致其不稳定。分子对接和模拟研究表明,这些化合物与USP7假定的底物结合口袋结合,因此可能会阻止底物进入。四种化合物,4-羟基二苯胺(2)、苯基-(2,3,4-三羟基苯基)甲酮(3)、4'-氨基-2',5'-二乙氧基苯甲酰苯胺(5)和对苯二酚(12),对结肠癌细胞(HCT116)显示出抗癌活性,IC值在31-143μM范围内。如使用qPCR分析所研究的,这些化合物还下调了HCT116细胞中MDM2基因的mRNA表达,并上调了p53基因的mRNA表达。因此,本研究鉴定出了几种USP7的负性调节剂,可作为潜在的抗癌药物进一步研究。