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FlyRNAi.org 2025年更新——为新技术和物种提供更多资源。

FlyRNAi.org 2025 update-expanded resources for new technologies and species.

作者信息

Hu Yanhui, Comjean Aram, Rodiger Jonathan, Chen Weihang, Kim Ah-Ram, Qadiri Mujeeb, Gao Chenxi, Zirin Jonathan, Mohr Stephanie E, Perrimon Norbert

机构信息

D epartment of Genetics, Blavatnik Institute, Harvard Medical School, 77 Avenue Louis Pasteur, Boston, MA 02115, USA.

Drosophila RNAi Screening Center, Harvard Medical School, 77 Avenue Louis Pasteur, Boston, MA 02115, USA.

出版信息

Nucleic Acids Res. 2025 Jan 6;53(D1):D958-D965. doi: 10.1093/nar/gkae917.

Abstract

The design, analysis and mining of large-scale 'omics studies with the goal of advancing biological and biomedical understanding require use of a range of bioinformatics tools, including approaches tailored to needs specific to a given species and/or technology. The FlyRNAi database at the Drosophila RNAi Screening Center and Transgenic RNAi Project (DRSC/TRiP) Functional Genomics Resources (https://fgr.hms.harvard.edu/tools) supports an increasingly broad group of technologies and species. Recently, for example, we expanded the database to include additional new data-centric resources that facilitate mining and analysis of single-cell transcriptomics. In addition, we have applied our approaches to CRISPR reagent and gene-centric bioinformatics approaches in Drosophila to arthropod vectors of infectious diseases. Building on our previous comprehensive reports on the FlyRNAi database, here we focus on new and updated resources with a primary focus on data-centric tools. Altogether, our suite of online resources supports various stages of functional genomics studies for Drosophila and other arthropods, and facilitate a wide range of reagent design, analysis, data mining and analysis approaches by biologists and biomedical experts studying Drosophila, other common genetic model species, arthropod vectors and/or human biology.

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ecdd/11701652/8b73024e6e29/gkae917figgra1.jpg

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