Department of Chemistry, Shanghai Stomatological Hospital, Obstetrics and Gynecology Hospital of Fudan University, and School of Pharmacy, Fudan University, Shanghai 200000, China.
Shanghai Tenth People's Hospital of Tongji University, Shanghai 200000, China.
Anal Chem. 2024 Nov 5;96(44):17679-17688. doi: 10.1021/acs.analchem.4c03726. Epub 2024 Oct 23.
Exosomes have emerged as a revolutionary tool for liquid biopsy (LB), as they carry specific cargo from cells. Profiling the metabolites of exosomes is crucial for cancer diagnosis and biomarker discovery. Herein, we propose a versatile platform for exosomal metabolite assay of endometrial cancer (EC). The platform is based on a nanostructured composite material comprising gold nanoparticle-coated magnetic COF with aptamer modification (FeO@COF@Au-Apt). The unique design and novel synthesis strategy of FeO@COF@Au-Apt provide the material with a large specific surface area, enabling the efficient and specific isolation of exosomes. The exosomes captured FeO@COF@Au-Apt can be directly used as the laser desorption/ionization mass spectrometry (LDI-MS) matrix for rapid exosomal metabolic patterns. By integrating these functionalities into a single platform, the analytical process is simplified, eliminating the need for additional elution steps and minimizing potential sample loss, resulting in large-scale exosomal metabolic fingerprints. Combining with machine learning algorithms on the metabolic patterns, accurate discrimination between endometrial patients (EGs) and benign controls (CGs) was achieved, and the area under the receiver operating characteristic curve of the blind test cohort was 0.924. Confusion matrix analysis of important metabolic fingerprint features further demonstrates the high accuracy of the proposed approach toward EC diagnosis, with an overall accuracy of 94.1%. Moreover, four metabolites, namely, hydroxychalcone, l-acetylcarnitine, elaidic acid, and glutathione, have been identified as potential biomarkers of EC. These results highlight the great value of the integrated exosome metabolic fingerprint platform in facilitating low-cost and high-throughput characterization of exosomal metabolites for cancer diagnosis and biomarker discovery.
外泌体作为液体活检 (LB) 的革命性工具已经出现,因为它们从细胞中携带特定的货物。分析外泌体的代谢物对于癌症诊断和生物标志物的发现至关重要。在此,我们提出了一种用于子宫内膜癌 (EC) 的外泌体代谢物分析的多功能平台。该平台基于一种由金纳米粒子包覆的磁性 COF 与适体修饰组成的纳米结构复合材料 (FeO@COF@Au-Apt)。FeO@COF@Au-Apt 的独特设计和新颖的合成策略为该材料提供了较大的比表面积,能够高效、特异的分离外泌体。捕获到外泌体的 FeO@COF@Au-Apt 可直接用作激光解吸/电离质谱 (LDI-MS) 基质,用于快速外泌体代谢模式。通过将这些功能集成到单个平台中,简化了分析过程,无需额外的洗脱步骤,最小化了潜在的样品损失,实现了大规模的外泌体代谢指纹图谱。结合代谢模式的机器学习算法,成功实现了子宫内膜患者 (EGs) 和良性对照 (CGs) 之间的准确区分,盲测试队列的接收者操作特征曲线下面积为 0.924。对重要代谢指纹特征的混淆矩阵分析进一步证明了该方法对 EC 诊断的高准确性,总体准确率为 94.1%。此外,还鉴定出了 4 种代谢物,即羟基查尔酮、l-乙酰肉碱、反油酸和谷胱甘肽,它们可能是 EC 的潜在生物标志物。这些结果突出了集成外泌体代谢指纹平台在促进低成本、高通量外泌体代谢物特征分析方面的巨大价值,可用于癌症诊断和生物标志物的发现。