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使用带型细胞遗传学对人类染色体异态性进行分类的挑战:从有争议的指南到对通用评分系统的需求。

Challenges in classifying human chromosomal heteromorphisms using banding cytogenetics: From controversial guidelines to the need for a universal scoring system.

作者信息

Pires Sílvia, Jorge Paula, Liehr Thomas, Oliva-Teles Natália

机构信息

Centro Hospitalar Universitário de Santo António, Unidade Local de Saúde de Santo António, Porto, Portugal.

Unit for Multidisciplinary Research in Biomedicine, Institute of Biomedical Sciences Abel Salazar, University of Porto, Porto, Portugal.

出版信息

Hum Genome Var. 2024 Oct 24;11(1):38. doi: 10.1038/s41439-024-00295-8.

Abstract

Chromosomal heteromorphisms (CHs) are morphological variations predominantly found in constitutive heterochromatic regions of the genome, primarily composed of tandemly repetitive sequences of satellite DNA. Although not completely devoid of genes, these regions are typically not transcribed into proteins and lack obvious phenotypic impact. Nonetheless, their clinical importance is increasingly under scrutiny, with several studies aiming to assess their influence on human diseases and susceptibilities, especially as they are seemingly part of the long noncoding RNAs in certain tissues. This article summarizes the classification methods of human heterochromatic CHs documented in the literature over the last two decades. Multiple scoring systems have been identified, and previous approaches for CH assessment and reporting in genetic diagnosis have shown inconsistencies. Owing to the current heterogeneity in the classification of CHs, data analysis may be biased, impacting the quality of clinical reports and human genetic research. This review highlights the need for a universal scoring system, which is essential for scientific reproducibility and the accurate identification and clinical evaluation of human CHs.

摘要

染色体异态性(CHs)是主要在基因组组成型异染色质区域发现的形态学变异,主要由卫星DNA的串联重复序列组成。虽然这些区域并非完全没有基因,但通常不会转录成蛋白质,也缺乏明显的表型影响。尽管如此,它们的临床重要性正受到越来越多的审视,多项研究旨在评估它们对人类疾病和易感性的影响,特别是因为它们似乎是某些组织中长链非编码RNA的一部分。本文总结了过去二十年文献中记载的人类异染色质CHs的分类方法。已确定了多种评分系统,并且先前在基因诊断中进行CH评估和报告的方法存在不一致之处。由于目前CHs分类的异质性,数据分析可能存在偏差,影响临床报告和人类遗传学研究的质量。本综述强调了通用评分系统的必要性,这对于科学的可重复性以及人类CHs的准确识别和临床评估至关重要。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3ed4/11499882/f3920df123af/41439_2024_295_Fig1_HTML.jpg

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