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复杂的多功能脂氧合酶在红藻中的进化。

Intricate Evolution of Multifunctional Lipoxygenase in Red Algae.

机构信息

Marine Drugs and Biological Products Department, Ningbo Institute of Oceanography, Ningbo 315832, China.

State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-Products, Ningbo University, Ningbo 315832, China.

出版信息

Int J Mol Sci. 2024 Oct 11;25(20):10956. doi: 10.3390/ijms252010956.

Abstract

Lipoxygenases (LOXs) from lower organisms have substrate flexibility and function versatility in fatty acid oxidation, but it is not clear how these LOXs acquired the ability to execute multiple functions within only one catalytic domain. This work studied a multifunctional LOX from red alga (PhLOX) which combined hydroperoxidelyase (HPL) and allene oxide synthase (AOS) activity in its active pocket. Molecular docking and site-directed mutagenesis revealed that Phe642 and Phe826 jointly regulated the double peroxidation of fatty acid, Gln777 and Asn575 were essential to the AOS function, and the HPL activity was improved when Asn575, Gln777, or Phe826 was replaced by leucine. Phylogenetic analysis indicated that Asn575 and Phe826 were unique amino acid sites in the separated clades clustered with PhLOX, whereas Phe642 and Gln777 were conserved in plant or animal LOXs. The N-terminal START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) domain of PhLOX was another key variable, as the absence of this domain disrupted the versatility of PhLOX. Moreover, the functions of two homologous LOXs from marine bacterium and red alga were examined. The HPL activity of PhLOX appeared to be inherited from a common ancestor, and the AOS function was likely acquired through mutations in some key residues in the active pocket. Taken together, our results suggested that some LOXs from red algae attained their versatility by amalgamating functional domains of ancestral origin and unique amino acid mutations.

摘要

脂氧合酶(LOXs)在脂肪酸氧化中具有底物灵活性和多功能性,但其在仅一个催化结构域中获得执行多种功能的能力的机制尚不清楚。本研究考察了一种多功能 LOX,它来自红藻(PhLOX),在其活性口袋中结合了氢过氧化物酶(HPL)和丙二烯氧化物合酶(AOS)活性。分子对接和定点突变揭示了 Phe642 和 Phe826 共同调节脂肪酸的双过氧化物化,Gln777 和 Asn575 对 AOS 功能至关重要,而当 Asn575、Gln777 或 Phe826 被亮氨酸取代时,HPL 活性得到提高。系统发育分析表明,Asn575 和 Phe826 是在与 PhLOX 聚类的分离枝中特有的氨基酸位点,而 Phe642 和 Gln777 在植物或动物 LOX 中保守。PhLOX 的 N 端起始/ Rho_alpha_C/PITP/Bet_v1/CoxG/CalC(SRPBCC)结构域是另一个关键可变结构域,因为该结构域的缺失破坏了 PhLOX 的多功能性。此外,还研究了来自海洋细菌和红藻的两种同源 LOX 的功能。PhLOX 的 HPL 活性似乎来自共同祖先,而 AOS 功能可能是通过活性口袋中某些关键残基的突变获得的。总之,我们的结果表明,一些来自红藻的 LOX 通过合并祖先起源的功能结构域和独特的氨基酸突变获得了多功能性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d86a/11507377/580cb4f71927/ijms-25-10956-g001.jpg

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