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一种新的致病性变异体拓宽了意大利人群的突变景观。

: A Novel Pathogenic Variant Broadening the Mutational Landscape in the Italian Population.

机构信息

Departmental Unit of Molecular and Genomic Diagnostics, Fondazione Policlinico Universitario Agostino Gemelli IRCCS, 00168 Rome, Italy.

Genomics Research Core Facility, Gemelli Science and Technology Park (GSTeP), Fondazione Policlinico Universitario Agostino Gemelli IRCCS, 00168 Rome, Italy.

出版信息

Genes (Basel). 2024 Oct 4;15(10):1298. doi: 10.3390/genes15101298.

Abstract

Glucose 6 phosphate dehydrogenase ( is a rate-limiting enzyme of the pentose phosphate pathway. The loss of activity in red blood cells increases the risk of acute haemolytic anaemia under oxidative stress induced by infections, some medications, or fava beans. More than 200 single missense mutations are known in the gene. A 41-year-old woman with a family history of favism coming from the Basilicata region (Italy) was evaluated at our hospital for abnormalities. DNA was extracted from a peripheral blood sample and genotyped for the most common pathogenic variants (PVs). Positive results obtained by Restriction Fragment Length Polymorphism (), as per practice in our laboratory, were then reconfirmed in Sanger sequencing. analysis highlighted a variant compatible with the variant. Confirmatory testing by Sanger unexpectedly identified a novel variant: c.1357G>A, p.(Val453Met) (NM_001360016.2); the same variant was found in the patient's mother. In silico models predicted a deleterious effect of this variant at the protein level. The novel variant was named "" on the basis of the patient's regional origin. This case describes a novel variant. It also highlights how the Sanger sequencing technique still represents an indispensable confirmatory standard method for variants that could be misinterpreted by only using a "first-level" approach, such as the . We stress that the evaluation of clinical manifestations in G6PD-deficient patients is of primary importance for the classification of each new mutation, in agreement with the new WHO guidelines.

摘要

葡萄糖-6-磷酸脱氢酶(G6PD)是戊糖磷酸途径的限速酶。红细胞中该酶活性的丧失会增加在感染、某些药物或豆类等引起的氧化应激下发生急性溶血性贫血的风险。在 G6PD 基因中已经发现了超过 200 种单个错义突变。一位 41 岁的女性,来自意大利巴西利卡塔地区,有蚕豆病家族史,因 G6PD 异常在我院就诊。从外周血样本中提取 DNA,并对最常见的致病性变异(PVs)进行基因分型。根据我们实验室的实践,用限制性片段长度多态性(RFLP)获得阳性结果,然后在 Sanger 测序中再次确认。分析突出了与 G6PD 变异相容的变体。Sanger 确认性测试出人意料地发现了一种新的变体:c.1357G>A,p.(Val453Met)(NM_001360016.2);该变体也存在于患者的母亲中。计算机模型预测该变体在蛋白质水平上具有有害影响。根据患者的原籍地,将这种新的 G6PD 变体命名为“”。该病例描述了一种新的 G6PD 变体。它还强调了在仅使用“一级”方法(如 RFLP)可能会误解变体的情况下,Sanger 测序技术仍然是一种不可或缺的确认标准方法。我们强调,对 G6PD 缺乏症患者的临床表现进行评估对于每种新 G6PD 突变的分类至关重要,这符合新的世卫组织指南。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fc7d/11507564/9aca62ed2e84/genes-15-01298-g001.jpg

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