Norris Vic
Laboratory of Bacterial Communication and Anti-Infection Strategies, EA 4312, University of Rouen, 76000 Rouen, France.
Life (Basel). 2024 Sep 24;14(10):1213. doi: 10.3390/life14101213.
In this very personal hunt for the meaning of the bacterial cell cycle, the , I briefly revisit and update some of the mechanisms we and many others have proposed to regulate the bacterial cell cycle. These mechanisms, which include the dynamics of calcium, membranes, hyperstructures, and networks, are based on physical and physico-chemical concepts such as ion condensation, phase transition, crowding, liquid crystal immiscibility, collective vibrational modes, reptation, and water availability. I draw on ideas from subjects such as the 'prebiotic ecology' and phenotypic diversity to help with the hunt. Given the fundamental nature of the , I would expect that its capture would make sense of other parts of biology. The route, therefore, followed by the hunt has involved trying to answer questions like "why do cells replicate their DNA?", "why is DNA replication semi-conservative?", "why is DNA a double helix?", "why do cells divide?", "is cell division a spandrel?", and "how are catabolism and anabolism balanced?". Here, I propose some relatively unexplored, experimental approaches to testing -related hypotheses and, finally, I propose some possibly original ideas about DNA packing, about phase separations, and about computing with populations of virtual bacteria.
在这场探寻细菌细胞周期意义的非常个人化的探索中,我简要回顾并更新了我们以及许多其他人提出的一些调控细菌细胞周期的机制。这些机制包括钙、膜、超结构和网络的动态变化,它们基于诸如离子凝聚、相变、拥挤、液晶不混溶性、集体振动模式、链段运动和水的可利用性等物理和物理化学概念。我借鉴了“益生元生态学”和表型多样性等学科的观点来助力这一探索。鉴于其基础性本质,我预计对它的理解将有助于阐释生物学的其他部分。因此,这场探索所遵循的路径涉及尝试回答诸如“细胞为何复制其DNA?”“为何DNA复制是半保留的?”“为何DNA是双螺旋结构?”“细胞为何分裂?”“细胞分裂是一种附带现象吗?”以及“分解代谢和合成代谢如何平衡?”等问题。在此,我提出一些相对未被充分探索的实验方法来检验与细胞周期相关的假设,最后,我提出一些关于DNA包装、相分离以及利用虚拟细菌群体进行计算的可能新颖的想法。