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长非编码 RNA 衍生的微小肽:在乳腺癌和其他疾病中的计算分析和功能作用。

Micropeptides derived from long non-coding RNAs: Computational analysis and functional roles in breast cancer and other diseases.

机构信息

Department of Breast Surgery, The First Affiliated Hospital of Anhui University of Traditional Chinese Medicine, Hefei 230031, China.

Department of Infection, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei 230000, China.

出版信息

Gene. 2025 Jan 30;935:149019. doi: 10.1016/j.gene.2024.149019. Epub 2024 Oct 24.

Abstract

Long non-coding RNAs (lncRNAs), once thought to be mere transcriptional noise, are now revealing a hidden code. Recent advancements like ribosome sequencing have unveiled that many lncRNAs harbor small open reading frames and can potentially encode functional micropeptides. Emerging research suggests these micropeptides, not the lncRNAs themselves, play crucial roles in regulating homeostasis, inflammation, metabolism, and especially in breast cancer progression. This review delves into the rapidly evolving computational tools used to predict and validate lncRNA-encoded micropeptides. We then explore the diverse functions and mechanisms of action of these micropeptides in breast cancer pathogenesis, with a focus on their roles in various species. Ultimately, this review aims to illuminate the functional landscape of lncRNA-encoded micropeptides and their potential as therapeutic targets in cancer.

摘要

长非编码 RNA(lncRNA),曾被认为是纯粹的转录噪声,如今却揭示了一种隐藏的密码。最近的进展,如核糖体测序,揭示了许多 lncRNA 拥有小开放阅读框,并可能编码功能性的微肽。新兴研究表明,这些微肽而不是 lncRNA 本身,在调节体内平衡、炎症、代谢以及特别是在乳腺癌进展中发挥着关键作用。本综述深入探讨了用于预测和验证 lncRNA 编码的微肽的快速发展的计算工具。然后,我们探讨了这些微肽在乳腺癌发病机制中的多种功能和作用机制,重点关注它们在各种物种中的作用。最终,本综述旨在阐明 lncRNA 编码的微肽的功能图谱及其作为癌症治疗靶点的潜力。

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