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肺癌腺癌中脂质代谢相关长链非编码RNA的机器学习模型构建与微环境异质性和免疫治疗相关。

Construction of machine learning models of lipid metabolism-related long non-coding RNA in lung adenocarcinoma is associated with microenvironmental heterogeneity and immunotherapy.

作者信息

Xiong Jiali, Xiao Kailan, He Huiyang, Tian Yuqiu

机构信息

Department of Respiratory and Critical Medicine, Zhuzhou Hospital Affiliated to Xiangya School of Medicine, Central South University, Zhuzhou, China.

Department of Ultrasound Diagnosis, Zhuzhou Hospital Affiliated to Xiangya School of Medicine, Central South University, Zhuzhou, China.

出版信息

Discov Oncol. 2024 Oct 29;15(1):600. doi: 10.1007/s12672-024-01469-0.

DOI:10.1007/s12672-024-01469-0
PMID:39470861
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11522256/
Abstract

Using various bioinformatics tools, we constructed a prognostic model integrating the expression profiles of lipid metabolization-related lncRNAs and clinical features. Our study discovered that various lipid metabolism-related lncRNAs were linked to the prognosis of lung adenocarcinoma. The link between immune cell infiltration in the tumour microenvironment and the expression level of lncRNAs involved with lipid metabolism was also investigated. Our findings suggest that there is a complex interplay between lipid metabolism, microenvironmental heterogeneity, and immunotherapy in lung adenocarcinoma. Furthermore, the study has significant clinical implications for the development of effective therapies for patients with lung adenocarcinoma by investigating the potential of these lncRNAs as biomarkers for anticipating the response to immunotherapy. Finally, our study emphasises the significance of continued analysis of lncRNAs associated with lipid metabolism in tumours to better understand the mechanisms behind the incidence and progression of lung adenocarcinoma. Several of the strengths of our work are the extensive analysis of the relationship between lipid metabolism and lncRNAs in lung adenocarcinoma and the utilization of a sizable sample size from the TCGA-LUAD cohort. However, there are also some limitations. Firstly, the mechanisms of how these lncRNAs interact with lipid metabolism pathways and immune response require further investigation. Secondly, our study was based on bioinformatics analysis and lacked experimental verification. Finally, our study was limited to the TCGA-LUAD cohort and further validation using other independent cohorts is required. In conclusion, our study provides a comprehensive and systematic analysis of lncRNAs associated with lipid metabolism in lung adenocarcinoma. Lung cancer patients may benefit from using identified lncRNAs as therapeutic targets and prognostic biomarkers. Validating these findings and confirming the potential therapeutic applications of these lncRNAs will require more mechanistic research.

摘要

利用各种生物信息学工具,我们构建了一个整合脂质代谢相关长链非编码RNA(lncRNA)表达谱和临床特征的预后模型。我们的研究发现,多种脂质代谢相关lncRNA与肺腺癌的预后相关。我们还研究了肿瘤微环境中免疫细胞浸润与参与脂质代谢的lncRNA表达水平之间的联系。我们的研究结果表明,在肺腺癌中,脂质代谢、微环境异质性和免疫治疗之间存在复杂的相互作用。此外,通过研究这些lncRNA作为预测免疫治疗反应的生物标志物的潜力,该研究对开发针对肺腺癌患者的有效治疗方法具有重要的临床意义。最后,我们的研究强调了持续分析肿瘤中与脂质代谢相关的lncRNA的重要性,以便更好地理解肺腺癌发生和进展背后的机制。我们工作的几个优点是对肺腺癌中脂质代谢与lncRNA之间的关系进行了广泛分析,并利用了来自TCGA-LUAD队列的大量样本。然而,也存在一些局限性。首先,这些lncRNA如何与脂质代谢途径和免疫反应相互作用的机制需要进一步研究。其次,我们的研究基于生物信息学分析,缺乏实验验证。最后,我们的研究仅限于TCGA-LUAD队列,需要使用其他独立队列进行进一步验证。总之,我们的研究对肺腺癌中与脂质代谢相关的lncRNA进行了全面系统的分析。肺癌患者可能会受益于将已鉴定的lncRNA用作治疗靶点和预后生物标志物。验证这些发现并确认这些lncRNA的潜在治疗应用将需要更多的机制研究。

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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3c12/11522256/825fc9904c76/12672_2024_1469_Fig6_HTML.jpg
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本文引用的文献

1
LncRNA TMPO-AS1 promotes esophageal squamous cell carcinoma progression by forming biomolecular condensates with FUS and p300 to regulate TMPO transcription.长链非编码 RNA TMPO-AS1 通过与 FUS 和 p300 形成生物分子凝聚物来调节 TMPO 转录,从而促进食管鳞状细胞癌的进展。
Exp Mol Med. 2022 Jun;54(6):834-847. doi: 10.1038/s12276-022-00791-3. Epub 2022 Jun 27.
2
Long Non-Coding RNA TMPO-AS1 Promotes GLUT1-Mediated Glycolysis and Paclitaxel Resistance in Endometrial Cancer Cells by Interacting With miR-140 and miR-143.长链非编码RNA TMPO-AS1通过与miR-140和miR-143相互作用促进子宫内膜癌细胞中GLUT1介导的糖酵解和紫杉醇耐药性。
Front Oncol. 2022 May 27;12:912935. doi: 10.3389/fonc.2022.912935. eCollection 2022.
3
attenuates hepatocellular carcinoma progression through the / axis.
通过/轴抑制肝癌进展。
Aging (Albany NY). 2022 Jan 6;14(1):368-388. doi: 10.18632/aging.203813.
4
Close interactions between lncRNAs, lipid metabolism and ferroptosis in cancer.长链非编码RNA、脂质代谢与癌症铁死亡之间的密切相互作用。
Int J Biol Sci. 2021 Oct 25;17(15):4493-4513. doi: 10.7150/ijbs.66181. eCollection 2021.
5
clusterProfiler 4.0: A universal enrichment tool for interpreting omics data.clusterProfiler 4.0:用于解释组学数据的通用富集工具。
Innovation (Camb). 2021 Jul 1;2(3):100141. doi: 10.1016/j.xinn.2021.100141. eCollection 2021 Aug 28.
6
Long non-coding RNA TMPO-AS1 facilitates the progression of colorectal cancer cells via sponging miR-98-5p to upregulate BCAT1 expression.长链非编码 RNA TMPO-AS1 通过海绵吸附 miR-98-5p 来上调 BCAT1 表达,促进结直肠癌细胞的进展。
J Gastroenterol Hepatol. 2022 Jan;37(1):144-153. doi: 10.1111/jgh.15657. Epub 2021 Nov 2.
7
Long non-coding RNA TMPO-AS1 facilitates chemoresistance and invasion in breast cancer by modulating the miR-1179/TRIM37 axis.长链非编码RNA TMPO-AS1通过调节miR-1179/TRIM37轴促进乳腺癌的化疗耐药性和侵袭能力。
Oncol Lett. 2021 Jul;22(1):500. doi: 10.3892/ol.2021.12761. Epub 2021 Apr 28.
8
Lipid metabolism and cancer.脂代谢与癌症。
J Exp Med. 2021 Jan 4;218(1). doi: 10.1084/jem.20201606.
9
Notch Transduction in Non-Small Cell Lung Cancer.非小细胞肺癌中的 Notch 转导。
Int J Mol Sci. 2020 Aug 8;21(16):5691. doi: 10.3390/ijms21165691.
10
LncRNA TMPO-AS1 promotes hepatocellular carcinoma cell proliferation, migration and invasion through sponging miR-329-3p to stimulate FOXK1-mediated AKT/mTOR signaling pathway.长链非编码 RNA TMPO-AS1 通过海绵吸附 miR-329-3p 来刺激 FOXK1 介导的 AKT/mTOR 信号通路,从而促进肝癌细胞的增殖、迁移和侵袭。
Cancer Med. 2020 Jul;9(14):5235-5246. doi: 10.1002/cam4.3046. Epub 2020 May 27.