Suppr超能文献

木犀草素-β-环糊精超分子复合物的计算与实验分析:构象动力学与相溶解度洞察

Computational and experimental analysis of Luteolin-β-cyclodextrin supramolecular complexes: Insights into conformational dynamics and phase solubility.

作者信息

Kumar Pramod, Bhardwaj Vijay Kumar, Shende Pravin, Purohit Rituraj

机构信息

Structural Bioinformatics Lab, Biotechnology Division, CSIR-Institute of Himalayan Bioresource Technology (CSIR-IHBT), Palampur, HP 176061, India; Academy of Scientific & Innovative Research (AcSIR), Ghaziabad 201002, India.

Shobhaben Pratapbhai Patel School of Pharmacy and Technology Management, SVKM'S NMIMS, V.L. Mehta Road, Vile Parle (W), Mumbai, India.

出版信息

Eur J Pharm Biopharm. 2024 Dec;205:114569. doi: 10.1016/j.ejpb.2024.114569. Epub 2024 Oct 29.

Abstract

Investigating the structural stability of poorly-soluble luteolin (LuT) after encapsulation within cyclodextrins (CDs) is crucial for unlocking the therapeutic potential of LuT bioactive molecule. Herein, native and modified β-CD were employed to investigate LuT inclusion complex formation. Molecular mechanics (MM) and quantum mechanics (QM) were utilized for structural dynamics analysis. Microsecond timescale MD simulations yielded insights into LuT-CD interactions. The binding affinity between LuT and selected β-CDs was assessed by calculating the binding free energy using MM-PBSA and umbrella sampling simulations. The MM-PBSA results indicated that Heptakis-O-(2-hydroxypropyl)-β-CD (HP-β-CD) (-82.59+/-11.67 kJ/mol) and Di-O-methyl-β-CD (DM-β-CD) (-54.01+/-11.07 kJ/mol) exhibited good binding affinity for LuT. Subsequently, derivative screening of HP-β-CD revealed that only 2-HP-β-CD (HP-β-CD-1)/LuT (-21.38 kJ/mol) displayed a superior binding free energy (obtained from umbrella sampling) than HP-β-CD/LuT (-16.55 kJ/mol) inclusion complex. We conducted QM calculations on the top three inclusion complexes namelly HP-β-CD, DM-β-CD, and HP-β-CD-1 employing wB97X-D/6-311 + G(d,p) model chemistry to strengthen the MM results. The computational analysis aligns with experimental findings (phase solubility analysis), validating HP-β-CD-1 as most effective cavitand molecule for improving the solubility of LuT. This study offers critical structural insights for developing novel HP-β-CD derivatives with enhanced host capacity to encapsulate guest molecules efficiently.

摘要

研究难溶性木犀草素(LuT)包封于环糊精(CDs)后的结构稳定性对于挖掘LuT生物活性分子的治疗潜力至关重要。在此,使用天然和改性β-环糊精来研究LuT包合物的形成。利用分子力学(MM)和量子力学(QM)进行结构动力学分析。微秒时间尺度的分子动力学(MD)模拟揭示了LuT与CDs之间的相互作用。通过使用MM-PBSA和伞形采样模拟计算结合自由能,评估了LuT与选定β-环糊精之间的结合亲和力。MM-PBSA结果表明,七(2-羟丙基)-β-环糊精(HP-β-CD)(-82.59±11.67 kJ/mol)和二-O-甲基-β-环糊精(DM-β-CD)(-54.01±11.07 kJ/mol)对LuT表现出良好的结合亲和力。随后,对HP-β-CD进行衍生物筛选,结果显示只有2-HP-β-CD(HP-β-CD-1)/LuT(-21.38 kJ/mol)的结合自由能(通过伞形采样获得)优于HP-β-CD/LuT(-16.55 kJ/mol)包合物。我们使用wB97X-D/6-311+G(d,p)模型化学方法对HP-β-CD、DM-β-CD和HP-β-CD-1这三种最主要的包合物进行了量子力学计算,以强化分子力学结果。计算分析与实验结果(相溶解度分析)一致,验证了HP-β-CD-1是提高LuT溶解度最有效的空穴分子。这项研究为开发具有增强主体能力以有效包封客体分子的新型HP-β-CD衍生物提供了关键的结构见解。

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验