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《免疫反应词典》揭示了单核细胞和核心靶点 IRF7 在椎间盘退变中的关键作用。

"Dictionary of immune responses" reveals the critical role of monocytes and the core target IRF7 in intervertebral disc degeneration.

机构信息

Department of Orthopaedics, The Second Affiliated Hospital, Jiangxi Medical College, Nanchang University, Nanchang, China.

Jiangxi Provincial Key Laboratory of Spine and Spinal Cord Disease, Nanchang University, Nanchang, China.

出版信息

Front Immunol. 2024 Oct 17;15:1465126. doi: 10.3389/fimmu.2024.1465126. eCollection 2024.

Abstract

BACKGROUND

Intervertebral disc degeneration (IDD) is widely regarded as the primary contributor to low back pain(LBP). As an immune-privileged organ, upon the onset of IDD, various components of the nucleus pulposus (NP) are exposed to the host's immune system, accumulating cytokines. Cytokines facilitate intercellular communication within the immune system, induce immune cells polarisation, and exacerbate oxidative stress in IDD.

METHODS

Machine learning was used to identify crucial immune cells. Subsequently, Immune Response Enrichment Analysis (IREA) was conducted on the key immune cells to determine their cytokine responses and polarisation states in IDD. "CellChat" package facilitated the analysis of cell-cell communication. Differential gene expression analysis, PPI network, GO and KEGG pathway enrichment analysis, GSVA, co-expressed gene analysis and key gene-related networks were also performed to explore hub genes and their associated functions. Lastly, the differential expression and functions of key genes were validated through and experiments.

RESULTS

Through multiple machine learning methods, monocytes were identified as the crucial immune cells in IDD, exhibiting significant differentiation capacity. IREA revealed that monocytes in IDD polarize into an IFN-a1 and IFN-b enriched Mono-a state, potentially intensifying inflammation. Cell-cell communication analysis uncovered alteration in ANNEXIN pathway and a reduction in CXCL signaling between macrophages and monocytes, suggesting immune response dysregulation. Furthermore, ten algorithms identified three hub genes. Both experiments conducted and have conclusively shown that IRF7 serves as a crucial target for the treatment of IDD, and its knockdown alleviates IDD. Eight small-molecule drugs were predicted to have therapeutic potential for IDD.

CONCLUSION

These findings offer a multidimensional understanding of the pathogenesis of IDD, pinpointing monocytes and key genes as potential diagnostic and therapeutic targets. They provide novel insights into potential diagnostic and therapeutic targets for IDD.

摘要

背景

椎间盘退变(IDD)被广泛认为是导致下腰痛(LBP)的主要原因。作为一个免疫特惠器官,一旦发生 IDD,核髓核(NP)的各种成分就会暴露于宿主的免疫系统中,积累细胞因子。细胞因子促进免疫系统内的细胞间通讯,诱导免疫细胞极化,并加剧 IDD 中的氧化应激。

方法

使用机器学习来识别关键免疫细胞。随后,对关键免疫细胞进行免疫反应富集分析(IREA),以确定它们在 IDD 中的细胞因子反应和极化状态。“CellChat”包促进了细胞间通讯的分析。差异基因表达分析、PPI 网络、GO 和 KEGG 通路富集分析、GSVA、共表达基因分析和关键基因相关网络也用于探索枢纽基因及其相关功能。最后,通过 和 实验验证了关键基因的差异表达和功能。

结果

通过多种机器学习方法,单核细胞被鉴定为 IDD 中的关键免疫细胞,表现出显著的分化能力。IREA 显示 IDD 中的单核细胞极化成为富含 IFN-a1 和 IFN-b 的 Mono-a 状态,可能会加剧炎症。细胞间通讯分析揭示了 ANNEXIN 途径的改变以及巨噬细胞和单核细胞之间 CXCL 信号的减少,表明免疫反应失调。此外,十种算法确定了三个枢纽基因。两项实验 和 都得出结论,IRF7 是治疗 IDD 的关键靶点,其敲低可缓解 IDD。预测有八种小分子药物对 IDD 具有治疗潜力。

结论

这些发现提供了对 IDD 发病机制的多维理解,指出单核细胞和关键基因是潜在的诊断和治疗靶点。它们为 IDD 的潜在诊断和治疗靶点提供了新的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e485/11524831/46ce61f1651a/fimmu-15-1465126-g001.jpg

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