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利用下一代测序技术对印度南部先兆子痫患者进行微小RNA分析以鉴定独特和常见的微小RNA

Profiling of MicroRNAs for the Identification of Unique and Common MicroRNAs in Preeclamptic Patients of South India Using Next-Generation Sequencing.

作者信息

Vijayan Vinaya, Rajendran Kannan, D'souza Aparajita, Subhashini Y, Tarakeswari S, Reddy B Ram, Vemuri Satish

机构信息

Department of Physiology, Saveetha Institute of Medical And Technical Sciences (SIMATS), Tiruvallur, IND.

Department of Internal Medicine, Saveetha Medical College and Research Centre, Kancheepuram, IND.

出版信息

Cureus. 2024 Oct 2;16(10):e70730. doi: 10.7759/cureus.70730. eCollection 2024 Oct.

Abstract

INTRODUCTION

Preeclampsia (PE) is a serious pregnancy complication with an unclear cause. Recent studies suggest that microRNAs (miRNAs), particularly miR-1, may play a role in controlling the genes associated with this condition. This study aimed to compare the expression of miRNAs in the blood and placental tissues of women with PE to those with normal pregnancies.

METHODS

We conducted small RNA sequencing on blood and placental samples from three groups: (a) early-onset preeclampsia (EOPE), (b) late-onset preeclampsia (LOPE), and (c) normal pregnancies. Bioinformatics tools were used to compare the miRNA profiles across these groups. A total of 744 miRNAs were detected in placental samples, while 913 miRNAs were found in blood samples. We further analyzed the target genes using protein-protein interaction (PPI) maps to understand how these miRNAs may influence gene functions.

RESULTS

Our analysis revealed significant differences in miRNA expression between the EOPE, LOPE, and control groups. Eight miRNAs were consistently detected in both blood and placental samples across all groups, while other miRNAs were either specific to PE or certain tissue types. The 492 target genes identified formed dense interaction networks, with several key genes occupying central roles.

CONCLUSION

These findings suggest that altered miRNA expression and the resulting disruption of gene networks may contribute to the development of PE. The distinct differences between EOPE and LOPE indicate that these two subtypes may be driven by different underlying mechanisms. This paves the way for future research to explore new treatments targeting these miRNAs and their associated genes.

摘要

引言

子痫前期(PE)是一种病因不明的严重妊娠并发症。最近的研究表明,微小RNA(miRNA),尤其是miR-1,可能在控制与该病症相关的基因方面发挥作用。本研究旨在比较子痫前期妇女与正常妊娠妇女血液和胎盘组织中miRNA的表达情况。

方法

我们对三组血液和胎盘样本进行了小RNA测序:(a)早发型子痫前期(EOPE),(b)晚发型子痫前期(LOPE),以及(c)正常妊娠。使用生物信息学工具比较这些组之间的miRNA谱。在胎盘样本中总共检测到744种miRNA,而在血液样本中发现了913种miRNA。我们进一步使用蛋白质-蛋白质相互作用(PPI)图谱分析靶基因,以了解这些miRNA如何影响基因功能。

结果

我们的分析揭示了EOPE、LOPE和对照组之间miRNA表达的显著差异。在所有组的血液和胎盘样本中均一致检测到8种miRNA,而其他miRNA要么是子痫前期特有的,要么是特定组织类型特有的。鉴定出的492个靶基因形成了密集的相互作用网络,几个关键基因占据中心位置。

结论

这些发现表明,miRNA表达的改变以及由此导致的基因网络破坏可能促成子痫前期的发展。早发型子痫前期和晚发型子痫前期之间的明显差异表明,这两种亚型可能由不同的潜在机制驱动。这为未来研究探索针对这些miRNA及其相关基因的新治疗方法铺平了道路。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c367/11530577/733e73f6fa36/cureus-0016-00000070730-i02.jpg

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