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从 F 溶液 NMR 光谱学角度深入了解蛋白质的结构和动力学。

Insights into the Structure and Dynamics of Proteins from F Solution NMR Spectroscopy.

机构信息

Department of Chemistry, IIT Bombay, Powai, Mumbai 400076, India.

出版信息

Biochemistry. 2024 Nov 19;63(22):2958-2968. doi: 10.1021/acs.biochem.4c00534. Epub 2024 Nov 4.

Abstract

F NMR spectroscopy has recently witnessed a resurgence as an attractive analytical tool for the study of the structure and dynamics of biomolecules in vitro and in cells, despite reports of its applications in biomolecular NMR since the 1970s. The high gyromagnetic ratio, large chemical shift dispersion, and complete absence of the spin 1/2 F nucleus from biomolecules results in background-free, high-resolution F NMR spectra. The introduction of F probes in a few selected locations in biomolecules reduces spectral crowding despite its increased line width in comparison to typical H NMR line widths and allows rapid site-specific measurements from simple 1D spectra alone. The design and synthesis of novel F probes with reduced line widths and increased chemical shift sensitivity to the surrounding environment, together with advances in labeling techniques, NMR methodology, and hardware, have overcome several drawbacks of F NMR spectroscopy. The increased interest and widespread use of F NMR spectroscopy of biomolecules is gradually establishing it as a sensitive and high-resolution probe of biomolecular structure and dynamics, supplementing traditional C/N-based methods. This Review focuses on the advances in F solution NMR spectroscopy of proteins in the past 5 years, with an emphasis on novel F tags and labeling techniques, NMR experiments to probe protein structure and conformational dynamics in vitro, and in-cell NMR applications.

摘要

F 核磁共振波谱学最近作为一种有吸引力的分析工具重新受到关注,用于研究体外和细胞内生物分子的结构和动力学,尽管自 20 世纪 70 年代以来就有关于其在生物分子核磁共振中的应用的报道。高磁旋比、大化学位移分散度以及生物分子中完全不存在自旋 1/2 F 核,导致 F NMR 光谱具有无背景、高分辨率的特点。尽管与典型的 H NMR 线宽相比,F 探针在生物分子中几个选定位置的引入会增加线宽,但它会减少光谱拥挤,并且允许仅通过简单的 1D 光谱进行快速的特定部位测量。具有减小的线宽和增加的对周围环境的化学位移灵敏度的新型 F 探针的设计和合成,以及标记技术、NMR 方法学和硬件方面的进步,克服了 F NMR 光谱学的几个缺点。对生物分子的 F NMR 光谱学的兴趣增加和广泛应用,逐渐使其成为生物分子结构和动力学的灵敏、高分辨率探针,补充了传统的基于 C/N 的方法。这篇综述重点介绍了过去 5 年中蛋白质 F 溶液 NMR 光谱学的进展,特别强调了新型 F 标签和标记技术、用于体外探测蛋白质结构和构象动力学的 NMR 实验以及细胞内 NMR 应用。

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